BLASTX nr result

ID: Cornus23_contig00001201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00001201
         (1260 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDY35298.1| BnaC03g59250D [Brassica napus]                         49   7e-08
ref|XP_010521406.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    53   2e-07
ref|XP_010555076.1| PREDICTED: uncharacterized protein LOC104824...    51   9e-07
ref|XP_013751760.1| PREDICTED: uncharacterized protein LOC106454...    47   2e-06
ref|XP_010543947.1| PREDICTED: uncharacterized protein LOC104816...    48   4e-06
ref|XP_008391159.1| PREDICTED: uncharacterized protein LOC103453...    47   9e-06

>emb|CDY35298.1| BnaC03g59250D [Brassica napus]
          Length = 205

 Score = 49.3 bits (116), Expect(2) = 7e-08
 Identities = 19/44 (43%), Positives = 28/44 (63%)
 Frame = +3

Query: 573 LYIFLA*PAPQVPWHHLVWLRPCVPRHNLILWFDIHNRLPTKDK 704
           +Y +L  P P VPW  LVW    +PRH+ + WF + +R PT+D+
Sbjct: 27  VYTYLKGPQPLVPWAKLVWFSYGIPRHSFLTWFVLLDRCPTRDR 70



 Score = 36.6 bits (83), Expect(2) = 7e-08
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 764 HLFFNCPSSSVIWEFFQELCGFHIRPTDWPDSMV 865
           HLFF CP S+ IW +    C  H   T W D+++
Sbjct: 94  HLFFECPYSTTIWSWIANRCDLHF-STSWDDTIL 126


>ref|XP_010521406.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104800308
            [Tarenaya hassleriana]
          Length = 1816

 Score = 52.8 bits (125), Expect(2) = 2e-07
 Identities = 19/37 (51%), Positives = 28/37 (75%)
 Frame = +3

Query: 594  PAPQVPWHHLVWLRPCVPRHNLILWFDIHNRLPTKDK 704
            P P+VPW+ LVW +  +PR++++LW  I  RLPTKD+
Sbjct: 1187 PKPKVPWYDLVWFKLAIPRYSIVLWQAISQRLPTKDR 1223



 Score = 31.2 bits (69), Expect(2) = 2e-07
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +2

Query: 758  HFHLFFNCPSSSVIWEFFQELCGFHIRPTDWPDSMVCSS 874
            H HLFF CP +S +W  +   C     P+   D  +C+S
Sbjct: 1245 HTHLFFACPYASALWNHYVGRCW----PSPPADIQLCTS 1279


>ref|XP_010555076.1| PREDICTED: uncharacterized protein LOC104824663 [Tarenaya
           hassleriana]
          Length = 551

 Score = 51.2 bits (121), Expect(2) = 9e-07
 Identities = 20/37 (54%), Positives = 25/37 (67%)
 Frame = +3

Query: 594 PAPQVPWHHLVWLRPCVPRHNLILWFDIHNRLPTKDK 704
           P PQV WH LVW R  +PR+  I W  + NRLPT+D+
Sbjct: 373 PKPQVQWHTLVWFRESIPRYAFIQWQAMQNRLPTRDR 409



 Score = 30.8 bits (68), Expect(2) = 9e-07
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = +2

Query: 758 HFHLFFNCPSSSVIWEFFQELC 823
           H HLFF C  S  IWE F   C
Sbjct: 431 HQHLFFKCRFSKQIWEHFTSCC 452


>ref|XP_013751760.1| PREDICTED: uncharacterized protein LOC106454134 [Brassica napus]
          Length = 287

 Score = 47.0 bits (110), Expect(2) = 2e-06
 Identities = 18/44 (40%), Positives = 27/44 (61%)
 Frame = +3

Query: 573 LYIFLA*PAPQVPWHHLVWLRPCVPRHNLILWFDIHNRLPTKDK 704
           +Y +L  P P VPW  LVW    +PRH+ + W  + +R PT+D+
Sbjct: 109 VYTYLKGPRPLVPWAKLVWFSYGIPRHSFLTWLVLLDRCPTRDR 152



 Score = 34.3 bits (77), Expect(2) = 2e-06
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 764 HLFFNCPSSSVIWEFFQELCGFHIRPTDWPDSMV 865
           HLFF CP S+ IW +    C  H+    W D+++
Sbjct: 176 HLFFECPYSNTIWTWIVNRCDLHL-SISWEDAIL 208


>ref|XP_010543947.1| PREDICTED: uncharacterized protein LOC104816716 [Tarenaya
           hassleriana]
          Length = 281

 Score = 48.1 bits (113), Expect(2) = 4e-06
 Identities = 19/36 (52%), Positives = 24/36 (66%)
 Frame = +3

Query: 594 PAPQVPWHHLVWLRPCVPRHNLILWFDIHNRLPTKD 701
           P P V W+ LVW +  VPR+  + W  +HNRLPTKD
Sbjct: 148 PKPAVQWYSLVWFQHYVPRYAFVQWQAMHNRLPTKD 183



 Score = 31.6 bits (70), Expect(2) = 4e-06
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 752 KIHFHLFFNCPSSSVIWEFFQELC 823
           +IH HLFF C  +  +W FF   C
Sbjct: 204 EIHQHLFFKCSYNKQLWSFFGSYC 227


>ref|XP_008391159.1| PREDICTED: uncharacterized protein LOC103453396 [Malus domestica]
          Length = 1219

 Score = 46.6 bits (109), Expect(2) = 9e-06
 Identities = 17/36 (47%), Positives = 24/36 (66%)
 Frame = +3

Query: 597  APQVPWHHLVWLRPCVPRHNLILWFDIHNRLPTKDK 704
            AP++PW HLVW    +PR + +LW  I N+L T D+
Sbjct: 1046 APKIPWDHLVWHNASIPRASFVLWLAIKNKLTTLDR 1081



 Score = 32.0 bits (71), Expect(2) = 9e-06
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 758  HFHLFFNCPSSSVIWEFFQELCGFHIRPTDWP 853
            H HLFF+CP +  +W+     CG       WP
Sbjct: 1103 HSHLFFDCPFTEGLWQHVLMRCGVPWLHPPWP 1134


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