BLASTX nr result

ID: Cornus23_contig00001021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00001021
         (660 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KNA25897.1| hypothetical protein SOVF_001800 [Spinacia oleracea]    60   1e-06
ref|XP_006842770.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    59   2e-06

>gb|KNA25897.1| hypothetical protein SOVF_001800 [Spinacia oleracea]
          Length = 620

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 29/43 (67%), Positives = 33/43 (76%)
 Frame = -3

Query: 265 MRTSWADSVAAAETVVSGTDNNASSGASRPTKSAYVPPHLRNR 137
           MRTSWADSVAAAE      + N +SG +RPTK+ YVPPHLRNR
Sbjct: 1   MRTSWADSVAAAE------NENGASGTTRPTKATYVPPHLRNR 37


>ref|XP_006842770.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37 [Amborella
           trichopoda] gi|548844884|gb|ERN04445.1| hypothetical
           protein AMTR_s00133p00101570 [Amborella trichopoda]
          Length = 621

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 31/47 (65%), Positives = 37/47 (78%), Gaps = 4/47 (8%)
 Frame = -3

Query: 265 MRTSWADSVA--AAETVVSGTDNN--ASSGASRPTKSAYVPPHLRNR 137
           MRTSWADSV+  AAE V +   NN  ASS +SRP++S+YVPPHLRNR
Sbjct: 1   MRTSWADSVSNSAAENVTAAATNNGPASSASSRPSRSSYVPPHLRNR 47