BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00001017
         (688 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP01388.1| unnamed protein product [Coffea canephora]             98   6e-18
ref|XP_010245873.1| PREDICTED: pentatricopeptide repeat-containi...    82   4e-13
ref|XP_012845185.1| PREDICTED: pentatricopeptide repeat-containi...    80   9e-13
ref|XP_009608341.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-12
ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-12
ref|XP_011090595.1| PREDICTED: pentatricopeptide repeat-containi...    79   3e-12
ref|XP_010681106.1| PREDICTED: pentatricopeptide repeat-containi...    79   3e-12
ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containi...    79   3e-12
ref|XP_009762907.1| PREDICTED: pentatricopeptide repeat-containi...    78   5e-12
ref|XP_002306340.2| pentatricopeptide repeat-containing family p...    78   6e-12
ref|XP_011021906.1| PREDICTED: pentatricopeptide repeat-containi...    76   2e-11
ref|XP_006354698.1| PREDICTED: pentatricopeptide repeat-containi...    76   2e-11
ref|XP_004237613.1| PREDICTED: pentatricopeptide repeat-containi...    76   2e-11
ref|XP_004296690.2| PREDICTED: pentatricopeptide repeat-containi...    75   3e-11
gb|KDO59989.1| hypothetical protein CISIN_1g010807mg [Citrus sin...    75   4e-11
ref|XP_006428072.1| hypothetical protein CICLE_v10025440mg [Citr...    75   4e-11
ref|XP_004504032.1| PREDICTED: pentatricopeptide repeat-containi...    74   9e-11
ref|XP_009345820.1| PREDICTED: pentatricopeptide repeat-containi...    74   1e-10
ref|XP_012456399.1| PREDICTED: pentatricopeptide repeat-containi...    73   2e-10
gb|KJB71228.1| hypothetical protein B456_011G111900 [Gossypium r...    73   2e-10

>emb|CDP01388.1| unnamed protein product [Coffea canephora]
          Length = 598

 Score = 97.8 bits (242), Expect = 6e-18
 Identities = 59/129 (45%), Positives = 75/129 (58%), Gaps = 7/129 (5%)
 Frame = -1

Query: 367 PLHFEFHDTMINISPNISSGSLQFLPVHTIFA-PKFCVSSLQN-CNTTQPCTFRKRPTYX 194
           PLH       +N++P+    +LQF P    F  PKF  +S QN  + +QPC  RK+P Y 
Sbjct: 57  PLHSPLPPAKVNMTPSNFPATLQFSPSKPAFLLPKFYPNSSQNFISVSQPCIARKKPIYC 116

Query: 193 XXXXXXXXXXXSTERN----SETEELVRVLLRNFDDKR-PLVSTLDKYVKFVRTEHCFRL 29
                         +     SE EELV +L+RNFD+K+ PLV+TL+KYVK VRTEHCF L
Sbjct: 117 IISNVPTRPKKKRTKTKRAISEAEELVGLLMRNFDEKKQPLVATLNKYVKLVRTEHCFLL 176

Query: 28  FEELGKRRK 2
           FEELGK  K
Sbjct: 177 FEELGKTDK 185


>ref|XP_010245873.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Nelumbo nucifera]
          Length = 491

 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
 Frame = -1

Query: 322 NISSGSLQFLPVHTIFAPKFCVSSLQNCNTTQPCT---FRKRPTYXXXXXXXXXXXXSTE 152
           N+++ SLQ   V T F  +F  SS+       PC    F  +P +               
Sbjct: 4   NLTALSLQLSSV-TPFPLQFRESSISKLKQAYPCPPQRFSLKPIHRISCIATRPKKRFAS 62

Query: 151 RNSETE--ELVRVLLRNFDDKRPLVSTLDKYVKFVRTEHCFRLFEELGKR 8
           ++ ++E  ELVR LLRNF D++PLVSTL+KYVK VRTEHCF LFEELGKR
Sbjct: 63  KSDKSEAGELVRFLLRNFSDQKPLVSTLNKYVKLVRTEHCFLLFEELGKR 112


>ref|XP_012845185.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Erythranthe guttatus]
           gi|604319904|gb|EYU31068.1| hypothetical protein
           MIMGU_mgv1a024034mg [Erythranthe guttata]
          Length = 496

 Score = 80.5 bits (197), Expect = 9e-13
 Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 4/117 (3%)
 Frame = -1

Query: 340 MINISPNISSGSLQF--LPVHTIFAPKFCVSSLQNC--NTTQPCTFRKRPTYXXXXXXXX 173
           M + +P  +S SL     P  T  +  F   +   C  +T + C++              
Sbjct: 1   MTSATPPFTSSSLHLPHTPKFTYISTPFRALTRHPCPPSTIRMCSWVSARPERNPGPRKT 60

Query: 172 XXXXSTERNSETEELVRVLLRNFDDKRPLVSTLDKYVKFVRTEHCFRLFEELGKRRK 2
               ++  +SE E+LV++++RNF DK+PLV+TLDKYVKFVRT+HCF LFEELGK  K
Sbjct: 61  HKRSTSSPSSEAEDLVKLIMRNFSDKQPLVNTLDKYVKFVRTDHCFLLFEELGKTEK 117


>ref|XP_009608341.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Nicotiana tomentosiformis]
          Length = 488

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 52/106 (49%), Positives = 62/106 (58%), Gaps = 5/106 (4%)
 Frame = -1

Query: 313 SGSLQFLPVHTIFAPKFCVSSLQNCNTTQPCTFRKRPTYXXXXXXXXXXXXS-----TER 149
           SGS+QF P  T   P F    L + N     T+ KRP +                  T  
Sbjct: 8   SGSVQF-PSSTTTTPTFQQPRLTH-NPWLNFTY-KRPVFYLIRCVSTRPGRKSGTTSTRG 64

Query: 148 NSETEELVRVLLRNFDDKRPLVSTLDKYVKFVRTEHCFRLFEELGK 11
           +SE +ELV +L+RNF DK+PLVSTL+KYVKFVRTEHCF LFEELGK
Sbjct: 65  SSEEQELVTLLMRNFSDKKPLVSTLNKYVKFVRTEHCFLLFEELGK 110


>ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Vitis vinifera]
           gi|296082481|emb|CBI21486.3| unnamed protein product
           [Vitis vinifera]
          Length = 489

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 46/110 (41%), Positives = 64/110 (58%)
 Frame = -1

Query: 331 ISPNISSGSLQFLPVHTIFAPKFCVSSLQNCNTTQPCTFRKRPTYXXXXXXXXXXXXSTE 152
           +SP  +  S +F     +  P    +++ +C +T+P   R++P                 
Sbjct: 20  LSPTFTLPSSRFYKPTRLHLPPRPSTTVVSCVSTRP---RRKP-------------GPKP 63

Query: 151 RNSETEELVRVLLRNFDDKRPLVSTLDKYVKFVRTEHCFRLFEELGKRRK 2
             SE EELVRVL++NF  +RPL+STL+KYVK +RTEHCFRLFEELGK  K
Sbjct: 64  DKSEVEELVRVLMKNFGGERPLISTLNKYVKVIRTEHCFRLFEELGKTDK 113


>ref|XP_011090595.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Sesamum indicum]
          Length = 492

 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 46/95 (48%), Positives = 59/95 (62%)
 Frame = -1

Query: 286 HTIFAPKFCVSSLQNCNTTQPCTFRKRPTYXXXXXXXXXXXXSTERNSETEELVRVLLRN 107
           H  F P    S+++ C +TQP   +K P               +  +SE E+LVR+L+RN
Sbjct: 33  HNPFPP----SAIRMCASTQP---KKIP-----GPKRINKKRGSSSSSEAEDLVRLLMRN 80

Query: 106 FDDKRPLVSTLDKYVKFVRTEHCFRLFEELGKRRK 2
           F DK+PLV+TL+KYVK VRTEHCF LFEELGK  K
Sbjct: 81  FTDKQPLVNTLNKYVKLVRTEHCFLLFEELGKSDK 115


>ref|XP_010681106.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Beta vulgaris subsp. vulgaris]
           gi|731339902|ref|XP_010681107.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Beta vulgaris subsp. vulgaris]
           gi|731339904|ref|XP_010681108.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Beta vulgaris subsp. vulgaris]
           gi|870857097|gb|KMT08673.1| hypothetical protein
           BVRB_6g139490 [Beta vulgaris subsp. vulgaris]
          Length = 487

 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 36/49 (73%), Positives = 42/49 (85%)
 Frame = -1

Query: 148 NSETEELVRVLLRNFDDKRPLVSTLDKYVKFVRTEHCFRLFEELGKRRK 2
           NSE +ELVR++LRNF DK PLVSTL+KYVK +RTEHCF LFE+LGK  K
Sbjct: 68  NSEAQELVRLILRNFSDKEPLVSTLNKYVKILRTEHCFMLFEDLGKSDK 116


>ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Cucumis sativus]
           gi|700193584|gb|KGN48788.1| hypothetical protein
           Csa_6G501290 [Cucumis sativus]
          Length = 528

 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 49/107 (45%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
 Frame = -1

Query: 313 SGSLQFLPVHTIFAPKFCVSSLQNCNTTQPCTFRKRPT---YXXXXXXXXXXXXSTERNS 143
           S SLQF P    F P +  S L       P + +K  +                 T+R S
Sbjct: 4   SFSLQFSPT---FTPSYSSSQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTDR-S 59

Query: 142 ETEELVRVLLRNFDDKRPLVSTLDKYVKFVRTEHCFRLFEELGKRRK 2
           E EELVR ++RNF DK PL+ TLDKYV+ +RTEHCF LFEELGKR K
Sbjct: 60  EAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDK 106


>ref|XP_009762907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Nicotiana sylvestris]
          Length = 488

 Score = 78.2 bits (191), Expect = 5e-12
 Identities = 51/110 (46%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
 Frame = -1

Query: 325 PNISSGSLQFLPVHTIFAPKFCVSSLQNCNTTQPCTFRKRPTYXXXXXXXXXXXXSTER- 149
           P   SGS+QF P  T   P F    L + N     T+ KRP +             +   
Sbjct: 4   PFSCSGSVQF-PCSTTTTPTFQQPKLTH-NPWLNFTY-KRPVFYVIRCVSTRPGRKSGTM 60

Query: 148 ----NSETEELVRVLLRNFDDKRPLVSTLDKYVKFVRTEHCFRLFEELGK 11
               +SE +ELV +L++NF DK+PLVSTL+KYVKFVRTEHCF LFEELGK
Sbjct: 61  SRIGSSEAQELVTLLMKNFSDKKPLVSTLNKYVKFVRTEHCFLLFEELGK 110


>ref|XP_002306340.2| pentatricopeptide repeat-containing family protein, partial
           [Populus trichocarpa] gi|550338395|gb|EEE93336.2|
           pentatricopeptide repeat-containing family protein,
           partial [Populus trichocarpa]
          Length = 414

 Score = 77.8 bits (190), Expect = 6e-12
 Identities = 42/81 (51%), Positives = 53/81 (65%)
 Frame = -1

Query: 244 NCNTTQPCTFRKRPTYXXXXXXXXXXXXSTERNSETEELVRVLLRNFDDKRPLVSTLDKY 65
           +C +T+P   +KRP               T+  SE +ELVRVL+R+F DK+PLV TL+KY
Sbjct: 9   SCVSTRP---KKRPV-------------PTDEKSEAQELVRVLVRSFSDKQPLVKTLNKY 52

Query: 64  VKFVRTEHCFRLFEELGKRRK 2
           VK +RTEHCF LFEELGK  K
Sbjct: 53  VKVMRTEHCFMLFEELGKTDK 73


>ref|XP_011021906.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Populus euphratica]
          Length = 487

 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 41/78 (52%), Positives = 52/78 (66%)
 Frame = -1

Query: 244 NCNTTQPCTFRKRPTYXXXXXXXXXXXXSTERNSETEELVRVLLRNFDDKRPLVSTLDKY 65
           +C +T+P   +KRP               T+  SE +ELVRVL+R+F DK+PLV TL+KY
Sbjct: 44  SCVSTRP---KKRPV-------------PTDDKSEAQELVRVLVRSFSDKQPLVKTLNKY 87

Query: 64  VKFVRTEHCFRLFEELGK 11
           VK +RTEHCF LFEELGK
Sbjct: 88  VKVMRTEHCFMLFEELGK 105


>ref|XP_006354698.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like isoform X1 [Solanum tuberosum]
           gi|565376411|ref|XP_006354699.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like isoform X2 [Solanum tuberosum]
           gi|565376413|ref|XP_006354700.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like isoform X3 [Solanum tuberosum]
          Length = 457

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 34/46 (73%), Positives = 41/46 (89%)
 Frame = -1

Query: 148 NSETEELVRVLLRNFDDKRPLVSTLDKYVKFVRTEHCFRLFEELGK 11
           +SE +ELV +++RNF DK+PLVSTLDKYVK VRTEHCF LFE+LGK
Sbjct: 34  SSEAQELVTLVMRNFSDKKPLVSTLDKYVKLVRTEHCFLLFEQLGK 79


>ref|XP_004237613.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Solanum lycopersicum]
           gi|723692221|ref|XP_010319770.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Solanum lycopersicum]
          Length = 478

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 34/46 (73%), Positives = 41/46 (89%)
 Frame = -1

Query: 148 NSETEELVRVLLRNFDDKRPLVSTLDKYVKFVRTEHCFRLFEELGK 11
           +SE +ELV +++RNF DK+PLVSTLDKYVK VRTEHCF LFE+LGK
Sbjct: 55  SSEAQELVTLVMRNFSDKKPLVSTLDKYVKLVRTEHCFLLFEQLGK 100


>ref|XP_004296690.2| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Fragaria vesca subsp. vesca]
          Length = 478

 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 35/49 (71%), Positives = 40/49 (81%)
 Frame = -1

Query: 148 NSETEELVRVLLRNFDDKRPLVSTLDKYVKFVRTEHCFRLFEELGKRRK 2
           NSE  E+VR+L+R+F DK PLV TL+KYVK VRTEHCF LFEELGK  K
Sbjct: 53  NSEAREMVRMLIRSFSDKEPLVKTLNKYVKIVRTEHCFLLFEELGKSGK 101


>gb|KDO59989.1| hypothetical protein CISIN_1g010807mg [Citrus sinensis]
          Length = 500

 Score = 75.1 bits (183), Expect = 4e-11
 Identities = 46/93 (49%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
 Frame = -1

Query: 265 FCVSSLQNCNTTQ---PCTFRKRPTYXXXXXXXXXXXXSTERNSETE--ELVRVLLRNFD 101
           F  SS QN N T    P + R RP                 ++ E E  ELVRVL+R+F 
Sbjct: 32  FNQSSSQNYNFTHRHIPLSLRTRPRTGICCVWTRPRSKRGRKSEELESKELVRVLMRSFS 91

Query: 100 DKRPLVSTLDKYVKFVRTEHCFRLFEELGKRRK 2
           DK PLV TL+KYVK VR+EHCF LFEELGK  K
Sbjct: 92  DKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDK 124


>ref|XP_006428072.1| hypothetical protein CICLE_v10025440mg [Citrus clementina]
           gi|568819570|ref|XP_006464322.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Citrus sinensis]
           gi|557530062|gb|ESR41312.1| hypothetical protein
           CICLE_v10025440mg [Citrus clementina]
          Length = 500

 Score = 75.1 bits (183), Expect = 4e-11
 Identities = 46/93 (49%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
 Frame = -1

Query: 265 FCVSSLQNCNTTQ---PCTFRKRPTYXXXXXXXXXXXXSTERNSETE--ELVRVLLRNFD 101
           F  SS QN N T    P + R RP                 ++ E E  ELVRVL+R+F 
Sbjct: 32  FNQSSSQNYNFTHRHIPLSLRTRPRTGICCVWTRPRSKRGRKSEELESKELVRVLMRSFS 91

Query: 100 DKRPLVSTLDKYVKFVRTEHCFRLFEELGKRRK 2
           DK PLV TL+KYVK VR+EHCF LFEELGK  K
Sbjct: 92  DKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDK 124


>ref|XP_004504032.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Cicer arietinum]
           gi|502140047|ref|XP_004504033.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Cicer arietinum]
          Length = 477

 Score = 73.9 bits (180), Expect = 9e-11
 Identities = 35/52 (67%), Positives = 40/52 (76%)
 Frame = -1

Query: 157 TERNSETEELVRVLLRNFDDKRPLVSTLDKYVKFVRTEHCFRLFEELGKRRK 2
           T   SET+ELVR+L R   +K PLV+TL+KYVK VRTEHCF LFEELGK  K
Sbjct: 46  TSERSETQELVRLLTRKISEKEPLVTTLNKYVKLVRTEHCFLLFEELGKHDK 97


>ref|XP_009345820.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Pyrus x bretschneideri]
           gi|694437606|ref|XP_009345821.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Pyrus x bretschneideri]
          Length = 486

 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 44/95 (46%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
 Frame = -1

Query: 268 KFCVSSLQNCNTTQPCT----FRKRPTYXXXXXXXXXXXXSTERNSETE--ELVRVLLRN 107
           +F   S QN + TQP       RKRP                 R  + E  E+VR L+R+
Sbjct: 16  QFTFHSSQNYSFTQPWLPHPLIRKRPRTQISCVSTRPKRNPGPRTEDPEVREVVRTLMRS 75

Query: 106 FDDKRPLVSTLDKYVKFVRTEHCFRLFEELGKRRK 2
           F DK PL+ TL+KYVK VRTEHCF LFEELGK  K
Sbjct: 76  FSDKEPLLKTLNKYVKIVRTEHCFMLFEELGKTDK 110


>ref|XP_012456399.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Gossypium raimondii]
          Length = 491

 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
 Frame = -1

Query: 232 TQPCTFRKRPTYXXXXXXXXXXXXSTER--NSETEELVRVLLRNFDDKRPLVSTLDKYVK 59
           TQPC    RP               + +  ++E +ELVRVL+R+F DK PLV TL +YV+
Sbjct: 32  TQPCNLPSRPITRISCTTRPRRKTGSSKPEDAEAKELVRVLMRSFGDKEPLVKTLSRYVR 91

Query: 58  FVRTEHCFRLFEELGKRRK 2
            VR EHCF LFEELGK  K
Sbjct: 92  VVRCEHCFLLFEELGKTDK 110


>gb|KJB71228.1| hypothetical protein B456_011G111900 [Gossypium raimondii]
           gi|763804291|gb|KJB71229.1| hypothetical protein
           B456_011G111900 [Gossypium raimondii]
           gi|763804292|gb|KJB71230.1| hypothetical protein
           B456_011G111900 [Gossypium raimondii]
          Length = 502

 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
 Frame = -1

Query: 232 TQPCTFRKRPTYXXXXXXXXXXXXSTER--NSETEELVRVLLRNFDDKRPLVSTLDKYVK 59
           TQPC    RP               + +  ++E +ELVRVL+R+F DK PLV TL +YV+
Sbjct: 43  TQPCNLPSRPITRISCTTRPRRKTGSSKPEDAEAKELVRVLMRSFGDKEPLVKTLSRYVR 102

Query: 58  FVRTEHCFRLFEELGKRRK 2
            VR EHCF LFEELGK  K
Sbjct: 103 VVRCEHCFLLFEELGKTDK 121