BLASTX nr result

ID: Cornus23_contig00000948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00000948
         (824 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABX26259.1| hypothetical protein [Panax quinquefolius]              62   4e-07

>gb|ABX26259.1| hypothetical protein [Panax quinquefolius]
          Length = 153

 Score = 62.4 bits (150), Expect = 4e-07
 Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 6/211 (2%)
 Frame = -2

Query: 790 MVIQTEVYPGAGYKQQTYTAFQEGWYP-GDDYNSNHWGMQMKPNPPIATPHHSNLHMMVD 614
           MV+Q+E +PG GY+QQ+Y   Q+G+Y  G  +  N   M   P P +++PH         
Sbjct: 1   MVLQSETFPG-GYQQQSY--LQDGYYSTGYGHGPN---MHTGPIPSLSSPH--------- 45

Query: 613 GSRPQQHEGWYGNNKQHQNGWQNSPSDY--HQGYGQNPXXXXXXXXXXXXXXXXXXXXXG 440
                     YG +  +Q GW ++ +DY  H   G+ P                      
Sbjct: 46  ----MMPSSCYGQHHHYQPGWHSTSTDYYSHGSNGRMP---------------------- 79

Query: 439 QMRPYNCNDTSQFTPGGKYANPMPT--IEYKNYPEVHVPTAPNMVEVVDYEYGKSGNGYP 266
                     S F+ G  +++ MPT   E   +   H P   + VE + +EY   GNG  
Sbjct: 80  ----------SSFSGGSSFSHGMPTGGFESSFHGATHSPMG-SKVESMKHEYSSYGNG-- 126

Query: 265 RCPNYDQNPGGQLYG-YQRKEWIVKNIDEDD 176
             P+   NP   ++G +Q  EW +K+I++DD
Sbjct: 127 -SPSMFHNP---MHGVHQSVEWKLKSIEDDD 153


Top