BLASTX nr result
ID: Cornus23_contig00000646
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00000646
(4049 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode... 2254 0.0
ref|XP_012091599.1| PREDICTED: DNA-directed RNA polymerase II su... 2241 0.0
ref|XP_009605280.1| PREDICTED: DNA-directed RNA polymerase II su... 2241 0.0
ref|XP_009765275.1| PREDICTED: DNA-directed RNA polymerase II su... 2240 0.0
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta... 2240 0.0
ref|XP_012449722.1| PREDICTED: DNA-directed RNA polymerase II su... 2239 0.0
ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II su... 2239 0.0
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ... 2238 0.0
ref|XP_010108197.1| DNA-directed RNA polymerase II subunit [Moru... 2236 0.0
ref|XP_007025631.1| DNA-directed RNA polymerase family protein i... 2235 0.0
ref|XP_003589372.2| DNA-directed RNA polymerase subunit beta [Me... 2232 0.0
ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su... 2231 0.0
ref|XP_011096303.1| PREDICTED: DNA-directed RNA polymerase II su... 2230 0.0
ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II su... 2230 0.0
ref|XP_014518479.1| PREDICTED: DNA-directed RNA polymerase II su... 2228 0.0
gb|KOM39913.1| hypothetical protein LR48_Vigan04g011100 [Vigna a... 2228 0.0
gb|KHN35874.1| DNA-directed RNA polymerase II subunit RPB2 [Glyc... 2228 0.0
ref|XP_014501986.1| PREDICTED: DNA-directed RNA polymerase II su... 2228 0.0
ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II su... 2227 0.0
gb|KHN28836.1| DNA-directed RNA polymerase II subunit RPB2 [Glyc... 2227 0.0
>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
Length = 1191
Score = 2254 bits (5841), Expect = 0.0
Identities = 1114/1173 (94%), Positives = 1135/1173 (96%)
Frame = -1
Query: 3935 EEEYDPSYNDDEEEEITQEDAWTVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 3756
EEEYDP+ +DEEEEITQEDAW VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI
Sbjct: 6 EEEYDPTM-EDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 64
Query: 3755 EIRPESQHNPGHQADFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 3576
EIRPESQHNPGHQ+DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP
Sbjct: 65 EIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 124
Query: 3575 LYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 3396
LYVDV+KRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY
Sbjct: 125 LYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 184
Query: 3395 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSSMFVR 3216
DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPS+MFVR
Sbjct: 185 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVR 244
Query: 3215 MLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMEL 3036
MLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DTQMMEL
Sbjct: 245 MLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMEL 304
Query: 3035 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETK 2856
LRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETK
Sbjct: 305 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETK 364
Query: 2855 KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKGYVQ 2676
KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+GYVQ
Sbjct: 365 KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 424
Query: 2675 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 2496
KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH
Sbjct: 425 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 484
Query: 2495 LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPI 2316
LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPI
Sbjct: 485 LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPI 544
Query: 2315 LEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVG 2136
LEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDM VNTEVG
Sbjct: 545 LEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVG 604
Query: 2135 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRETPEDGGWHDLVAKGF 1956
VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIK+KDIQ LQQRETPEDGGWHDLVAKGF
Sbjct: 605 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGF 664
Query: 1955 XXXXXXXXXXXXXXXXXINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHN 1776
INDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 665 IEYIDTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHN 724
Query: 1775 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 1596
QSPRNTYQSAMGKQAMGIYVTNYQFRMDT+AYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 725 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTVAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 784
Query: 1595 AIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRGNT 1416
AIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR NT
Sbjct: 785 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 844
Query: 1415 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQSSRYTKRDHSTSLRHS 1236
MGMRHGSYDKLDDDGLAPPGTRVSGEDV+IGKTTPIAQD+AQG ++RYT+RDHSTSLRHS
Sbjct: 845 MGMRHGSYDKLDDDGLAPPGTRVSGEDVVIGKTTPIAQDEAQGPAARYTRRDHSTSLRHS 904
Query: 1235 ETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 1056
ETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 905 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTME 964
Query: 1055 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 876
GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 965 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1024
Query: 875 QMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 696
QMRGFETMYNGHTGR+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1025 QMRGFETMYNGHTGRRLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1084
Query: 695 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGC 516
DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCE+CGLIAIANLKKNSFECRGC
Sbjct: 1085 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGC 1144
Query: 515 KNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 417
KNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT
Sbjct: 1145 KNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 1177
>ref|XP_012091599.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Jatropha
curcas]
Length = 1193
Score = 2241 bits (5807), Expect = 0.0
Identities = 1112/1179 (94%), Positives = 1130/1179 (95%), Gaps = 3/1179 (0%)
Frame = -1
Query: 3944 MDLEEEYDPSYNDDE---EEEITQEDAWTVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 3774
MD E EYD ND+E EEEITQEDAW VISAYFEEKGLVRQQLDSFDEFIQNTMQEIV
Sbjct: 1 MDDEHEYDQPLNDEEDDGEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 60
Query: 3773 DESADIEIRPESQHNPGHQADFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRN 3594
DESADIEIRPESQHNPGHQ DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRN
Sbjct: 61 DESADIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRN 120
Query: 3593 LTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTE 3414
LTYSAPLYVDV+KRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTE
Sbjct: 121 LTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTE 180
Query: 3413 LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPP 3234
LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPP
Sbjct: 181 LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPP 240
Query: 3233 SSMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSD 3054
SSMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSD
Sbjct: 241 SSMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSD 300
Query: 3053 TQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVG 2874
TQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVG
Sbjct: 301 TQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVG 360
Query: 2873 EYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRD 2694
EYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLT+D
Sbjct: 361 EYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTKD 420
Query: 2693 VKGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY 2514
V+ YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY
Sbjct: 421 VRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY 480
Query: 2513 ASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVG 2334
ASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVG
Sbjct: 481 ASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVG 540
Query: 2333 SAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXX 2154
SAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDM
Sbjct: 541 SAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVD 600
Query: 2153 VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRETPEDGGWHD 1974
VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI LQQRE+ E+GGWHD
Sbjct: 601 VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHD 660
Query: 1973 LVAKGFXXXXXXXXXXXXXXXXXINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASII 1794
LVAKGF I+DLV AR+NPEEAYS+TYTHCEIHPSLILGVCASII
Sbjct: 661 LVAKGFIEYIDTEEEETTMISMTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASII 720
Query: 1793 PFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQ 1614
PFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQ
Sbjct: 721 PFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQ 780
Query: 1613 LPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 1434
LPAGINAIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGR
Sbjct: 781 LPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 840
Query: 1433 PDRGNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQSSRYTKRDHS 1254
PDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQ++AQGQS+RYT+RDHS
Sbjct: 841 PDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHS 900
Query: 1253 TSLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 1074
SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 901 ISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 960
Query: 1073 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 894
MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 961 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 1020
Query: 893 LHKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 714
LHKCGYQMRGFETMYNGHTGR+LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1021 LHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1080
Query: 713 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNS 534
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNS
Sbjct: 1081 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS 1140
Query: 533 FECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 417
FECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1179
>ref|XP_009605280.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
[Nicotiana tomentosiformis]
Length = 1191
Score = 2241 bits (5806), Expect = 0.0
Identities = 1107/1177 (94%), Positives = 1134/1177 (96%), Gaps = 1/1177 (0%)
Frame = -1
Query: 3944 MDLEEEYDPSYN-DDEEEEITQEDAWTVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 3768
MD EEEY+ YN DD+EEEITQEDAW VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDTEEEYEQQYNNDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 3767 SADIEIRPESQHNPGHQADFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT 3588
SADIEIRPESQHNPGHQ+DF ETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLT
Sbjct: 61 SADIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLT 120
Query: 3587 YSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 3408
YSAPLYVDV+KRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG
Sbjct: 121 YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 180
Query: 3407 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSS 3228
ECP DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS+
Sbjct: 181 ECPLDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPST 240
Query: 3227 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQ 3048
MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DTQ
Sbjct: 241 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQ 300
Query: 3047 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEY 2868
MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVG+GEY
Sbjct: 301 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGIGEY 360
Query: 2867 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVK 2688
CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+
Sbjct: 361 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 420
Query: 2687 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 2508
YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
Sbjct: 421 AYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 480
Query: 2507 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 2328
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA
Sbjct: 481 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 540
Query: 2327 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVN 2148
AYPILEFLEEWGTENFEEISPAVIPQATKIFVNG WVGIHRDPDM VN
Sbjct: 541 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVN 600
Query: 2147 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRETPEDGGWHDLV 1968
TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQ LQQRE+PE+GGWHDLV
Sbjct: 601 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLV 660
Query: 1967 AKGFXXXXXXXXXXXXXXXXXINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPF 1788
AKG+ INDLV ARLNPEEAYS+TYTHCEIHPSLILGVCASIIPF
Sbjct: 661 AKGYIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPF 720
Query: 1787 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 1608
PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
Sbjct: 721 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 780
Query: 1607 AGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 1428
AGINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD
Sbjct: 781 AGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 840
Query: 1427 RGNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQSSRYTKRDHSTS 1248
R +TMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+QDDAQGQ+SRYT++DHSTS
Sbjct: 841 RASTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTS 900
Query: 1247 LRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP 1068
LRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP
Sbjct: 901 LRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP 960
Query: 1067 WTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALH 888
WTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALH
Sbjct: 961 WTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALH 1020
Query: 887 KCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE 708
KCGYQMRGFETMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE
Sbjct: 1021 KCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE 1080
Query: 707 GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFE 528
GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFE
Sbjct: 1081 GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFE 1140
Query: 527 CRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 417
CRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 CRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1177
>ref|XP_009765275.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
[Nicotiana sylvestris]
Length = 1191
Score = 2240 bits (5804), Expect = 0.0
Identities = 1106/1177 (93%), Positives = 1135/1177 (96%), Gaps = 1/1177 (0%)
Frame = -1
Query: 3944 MDLEEEYDPSYN-DDEEEEITQEDAWTVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 3768
MD+EEEY+ YN DD+EEEITQEDAW VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDMEEEYEQQYNNDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 3767 SADIEIRPESQHNPGHQADFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT 3588
SADIEIRPESQHNPGHQ+DF ETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLT
Sbjct: 61 SADIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLT 120
Query: 3587 YSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 3408
YSAPLYVDV+KRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG
Sbjct: 121 YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 180
Query: 3407 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSS 3228
ECP DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS+
Sbjct: 181 ECPLDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPST 240
Query: 3227 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQ 3048
MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DTQ
Sbjct: 241 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQ 300
Query: 3047 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEY 2868
MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVG+GEY
Sbjct: 301 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGIGEY 360
Query: 2867 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVK 2688
CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+
Sbjct: 361 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 420
Query: 2687 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 2508
YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
Sbjct: 421 AYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 480
Query: 2507 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 2328
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA
Sbjct: 481 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 540
Query: 2327 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVN 2148
AYPILEFLEEWGTENFEEISPAVIPQATKIFVNG WVGIHRDPDM VN
Sbjct: 541 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVN 600
Query: 2147 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRETPEDGGWHDLV 1968
TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQ LQQRE+PE+GGWHDLV
Sbjct: 601 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLV 660
Query: 1967 AKGFXXXXXXXXXXXXXXXXXINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPF 1788
AKG+ INDLV ARLNPEEAYS+TYTHCEIHPSLILGVCASIIPF
Sbjct: 661 AKGYIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPF 720
Query: 1787 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 1608
PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
Sbjct: 721 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 780
Query: 1607 AGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 1428
AGINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD
Sbjct: 781 AGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 840
Query: 1427 RGNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQSSRYTKRDHSTS 1248
R +TMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+QDDAQGQ+SRYT++DHSTS
Sbjct: 841 RASTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTS 900
Query: 1247 LRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP 1068
LRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP
Sbjct: 901 LRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP 960
Query: 1067 WTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALH 888
WTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALH
Sbjct: 961 WTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALH 1020
Query: 887 KCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE 708
KCGYQMRGFETMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE
Sbjct: 1021 KCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE 1080
Query: 707 GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFE 528
GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKK+SFE
Sbjct: 1081 GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKSSFE 1140
Query: 527 CRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 417
CRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 CRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1177
>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
II subunit, putative [Ricinus communis]
Length = 1194
Score = 2240 bits (5804), Expect = 0.0
Identities = 1109/1180 (93%), Positives = 1133/1180 (96%), Gaps = 4/1180 (0%)
Frame = -1
Query: 3944 MDLEEEYDPS----YNDDEEEEITQEDAWTVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 3777
M+ ++EYD + Y D++E+EITQEDAW VISAYFEEKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MEDDQEYDQNLNEDYEDEDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 3776 VDESADIEIRPESQHNPGHQADFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 3597
VDESADIEIRPESQHNPGHQ+DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR
Sbjct: 61 VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120
Query: 3596 NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 3417
NLTYSAPLYVDV+KRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT
Sbjct: 121 NLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180
Query: 3416 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRP 3237
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRP
Sbjct: 181 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 240
Query: 3236 PSSMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 3057
PS+MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS
Sbjct: 241 PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 300
Query: 3056 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 2877
DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV
Sbjct: 301 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 360
Query: 2876 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 2697
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
Sbjct: 361 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420
Query: 2696 DVKGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 2517
DV+ YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421 DVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480
Query: 2516 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 2337
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
Sbjct: 481 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540
Query: 2336 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXX 2157
GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDM
Sbjct: 541 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRV 600
Query: 2156 XVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRETPEDGGWH 1977
VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI LQQRE+ E+GGWH
Sbjct: 601 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWH 660
Query: 1976 DLVAKGFXXXXXXXXXXXXXXXXXINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASI 1797
DLVAKGF I+DLV AR+NPEEAYS+TYTHCEIHPSLILGVCASI
Sbjct: 661 DLVAKGFIEYIDTEEEETTMISMTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASI 720
Query: 1796 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1617
IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780
Query: 1616 QLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 1437
QLPAGINAIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840
Query: 1436 RPDRGNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQSSRYTKRDH 1257
RPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQ++AQGQS+RYT+RDH
Sbjct: 841 RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDH 900
Query: 1256 STSLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 1077
S SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
Sbjct: 901 SISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 960
Query: 1076 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 897
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK
Sbjct: 961 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 1020
Query: 896 ALHKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 717
ALHKCGYQMRGFETMYNGHTGR+LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
Sbjct: 1021 ALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 1080
Query: 716 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKN 537
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKN
Sbjct: 1081 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN 1140
Query: 536 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 417
SFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 SFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1180
>ref|XP_012449722.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Gossypium
raimondii] gi|823234175|ref|XP_012449723.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB2 [Gossypium
raimondii] gi|728847618|gb|KHG27061.1| DNA-directed RNA
polymerase II subunit RPB2 [Gossypium arboreum]
gi|763801668|gb|KJB68623.1| hypothetical protein
B456_010G255400 [Gossypium raimondii]
gi|763801669|gb|KJB68624.1| hypothetical protein
B456_010G255400 [Gossypium raimondii]
Length = 1189
Score = 2239 bits (5803), Expect = 0.0
Identities = 1108/1177 (94%), Positives = 1131/1177 (96%), Gaps = 1/1177 (0%)
Frame = -1
Query: 3944 MDLEEEYDPSYNDDEE-EEITQEDAWTVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 3768
M+ + EYDP +DE+ EEITQEDAW VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MEDDSEYDPQLMEDEDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 3767 SADIEIRPESQHNPGHQADFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT 3588
SADIEIRPESQHNPGHQ+DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT
Sbjct: 61 SADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT 120
Query: 3587 YSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 3408
YSAPLYVDV+KRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG
Sbjct: 121 YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 180
Query: 3407 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSS 3228
ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPS+
Sbjct: 181 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPST 240
Query: 3227 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQ 3048
MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQ
Sbjct: 241 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQ 300
Query: 3047 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEY 2868
MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGE+
Sbjct: 301 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEF 360
Query: 2867 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVK 2688
CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+
Sbjct: 361 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 420
Query: 2687 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 2508
YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
Sbjct: 421 SYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 480
Query: 2507 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 2328
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA
Sbjct: 481 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 540
Query: 2327 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVN 2148
AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVG+HR+PDM VN
Sbjct: 541 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVN 600
Query: 2147 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRETPEDGGWHDLV 1968
TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI LQQRETPEDGGWHDLV
Sbjct: 601 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRETPEDGGWHDLV 660
Query: 1967 AKGFXXXXXXXXXXXXXXXXXINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPF 1788
AKGF INDLV AR+NPEEAYSETYTHCEIHPSLILGVCASIIPF
Sbjct: 661 AKGFIEYIDTEEEETTMISMTINDLVQARINPEEAYSETYTHCEIHPSLILGVCASIIPF 720
Query: 1787 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 1608
PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
Sbjct: 721 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 780
Query: 1607 AGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 1428
AGINAIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD
Sbjct: 781 AGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 840
Query: 1427 RGNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQSSRYTKRDHSTS 1248
R TMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+Q++AQGQ+SRY+KRDHS S
Sbjct: 841 RATTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQASRYSKRDHSIS 900
Query: 1247 LRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP 1068
LRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP
Sbjct: 901 LRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP 960
Query: 1067 WTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALH 888
WTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALH
Sbjct: 961 WTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALH 1020
Query: 887 KCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE 708
KCGYQMRGFETMYNGHTGR+LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE
Sbjct: 1021 KCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE 1080
Query: 707 GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFE 528
GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFE
Sbjct: 1081 GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFE 1140
Query: 527 CRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 417
CRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 CRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1177
>ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Solanum
tuberosum]
Length = 1191
Score = 2239 bits (5803), Expect = 0.0
Identities = 1105/1177 (93%), Positives = 1135/1177 (96%), Gaps = 1/1177 (0%)
Frame = -1
Query: 3944 MDLEEEYDPSYN-DDEEEEITQEDAWTVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 3768
MDLE+EY+P YN DD+EEEITQEDAW VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDLEDEYEPQYNVDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 3767 SADIEIRPESQHNPGHQADFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT 3588
SADIEIRPESQHNPGHQ+DF ETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLT
Sbjct: 61 SADIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLT 120
Query: 3587 YSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 3408
YSAPLYVDV+KRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG
Sbjct: 121 YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 180
Query: 3407 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSS 3228
ECP DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS+
Sbjct: 181 ECPLDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPST 240
Query: 3227 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQ 3048
MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DTQ
Sbjct: 241 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQ 300
Query: 3047 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEY 2868
MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGEY
Sbjct: 301 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY 360
Query: 2867 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVK 2688
CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+
Sbjct: 361 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 420
Query: 2687 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 2508
GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
Sbjct: 421 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 480
Query: 2507 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 2328
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA
Sbjct: 481 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 540
Query: 2327 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVN 2148
AYPILEFLEEWGTENFEEISPAVIPQATKIFVNG WVGIHRDPDM VN
Sbjct: 541 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVN 600
Query: 2147 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRETPEDGGWHDLV 1968
TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRL+IKKKDIQ LQQRE+P++GGWHDLV
Sbjct: 601 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLV 660
Query: 1967 AKGFXXXXXXXXXXXXXXXXXINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPF 1788
AKG+ INDLV ARLNP +AYS+TYTHCEIHPSLILGVCASIIPF
Sbjct: 661 AKGYIEYIDTEEEETTMISMTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPF 720
Query: 1787 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 1608
PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
Sbjct: 721 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 780
Query: 1607 AGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 1428
AGINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD
Sbjct: 781 AGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 840
Query: 1427 RGNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQSSRYTKRDHSTS 1248
R TMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+QDDAQGQ+SRYT++DHSTS
Sbjct: 841 RATTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTS 900
Query: 1247 LRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP 1068
LRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP
Sbjct: 901 LRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP 960
Query: 1067 WTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALH 888
WTVEGI+PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALH
Sbjct: 961 WTVEGISPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALH 1020
Query: 887 KCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE 708
KCGYQMRGFETMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE
Sbjct: 1021 KCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE 1080
Query: 707 GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFE 528
GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFE
Sbjct: 1081 GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFE 1140
Query: 527 CRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 417
CRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 CRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1177
>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
Full=DNA-directed RNA polymerase II subunit RPB2;
Short=RNA polymerase II subunit 2; Short=RNA polymerase
II subunit B2; AltName: Full=DNA-directed RNA polymerase
II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
polymerase II subunit 2 [Solanum lycopersicum]
Length = 1191
Score = 2238 bits (5800), Expect = 0.0
Identities = 1103/1177 (93%), Positives = 1136/1177 (96%), Gaps = 1/1177 (0%)
Frame = -1
Query: 3944 MDLEEEYDPSYN-DDEEEEITQEDAWTVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 3768
MD+E+EY+P YN DD+EEEITQEDAW VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDMEDEYEPQYNVDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 3767 SADIEIRPESQHNPGHQADFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT 3588
SADIEIRPESQHNPGHQ+DF ETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLT
Sbjct: 61 SADIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLT 120
Query: 3587 YSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 3408
YSAPLYVDV+KRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG
Sbjct: 121 YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 180
Query: 3407 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSS 3228
ECP DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMA++QNRPPS+
Sbjct: 181 ECPLDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMADTQNRPPST 240
Query: 3227 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQ 3048
MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DTQ
Sbjct: 241 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQ 300
Query: 3047 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEY 2868
MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGEY
Sbjct: 301 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY 360
Query: 2867 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVK 2688
CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+
Sbjct: 361 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 420
Query: 2687 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 2508
GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
Sbjct: 421 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 480
Query: 2507 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 2328
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA
Sbjct: 481 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 540
Query: 2327 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVN 2148
AYPILEFLEEWGTENFEEISPAVIPQATKIFVNG WVGIHRDPDM VN
Sbjct: 541 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVN 600
Query: 2147 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRETPEDGGWHDLV 1968
TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRL+IKKKDIQ LQQRE+P++GGWHDLV
Sbjct: 601 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLV 660
Query: 1967 AKGFXXXXXXXXXXXXXXXXXINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPF 1788
AKG+ INDLV ARLNP +AYS+TYTHCEIHPSLILGVCASIIPF
Sbjct: 661 AKGYIEYIDTEEEETTMISMTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPF 720
Query: 1787 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 1608
PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
Sbjct: 721 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 780
Query: 1607 AGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 1428
AGINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD
Sbjct: 781 AGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 840
Query: 1427 RGNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQSSRYTKRDHSTS 1248
R +TMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+QDDAQGQ+SRYT++DHSTS
Sbjct: 841 RASTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTS 900
Query: 1247 LRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP 1068
LRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP
Sbjct: 901 LRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP 960
Query: 1067 WTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALH 888
WTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALH
Sbjct: 961 WTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALH 1020
Query: 887 KCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE 708
KCGYQMRGFETMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE
Sbjct: 1021 KCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE 1080
Query: 707 GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFE 528
GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFE
Sbjct: 1081 GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFE 1140
Query: 527 CRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 417
CRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 CRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1177
>ref|XP_010108197.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
gi|587931023|gb|EXC18122.1| DNA-directed RNA polymerase
II subunit [Morus notabilis]
Length = 1193
Score = 2236 bits (5794), Expect = 0.0
Identities = 1107/1179 (93%), Positives = 1131/1179 (95%), Gaps = 3/1179 (0%)
Frame = -1
Query: 3944 MDLEEEYDPSYNDDEE--EEITQEDAWTVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD 3771
M+ + EYD YNDD++ EEITQEDAW VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD
Sbjct: 1 MEDDHEYDQQYNDDDDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD 60
Query: 3770 ESADIEIRPESQHNPGHQADFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNL 3591
ESADIEIRPESQHNPGHQ+DF+ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNL
Sbjct: 61 ESADIEIRPESQHNPGHQSDFVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNL 120
Query: 3590 TYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL 3411
TYSAPLYVDV+KRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL
Sbjct: 121 TYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL 180
Query: 3410 GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPS 3231
GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPS
Sbjct: 181 GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPS 240
Query: 3230 SMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDT 3051
+MFVRMLSRTS+KGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDT
Sbjct: 241 TMFVRMLSRTSSKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDT 300
Query: 3050 QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGE 2871
QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVG GE
Sbjct: 301 QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGTGE 360
Query: 2870 YCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV 2691
+CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV
Sbjct: 361 FCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV 420
Query: 2690 KGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA 2511
+GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA
Sbjct: 421 RGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA 480
Query: 2510 STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS 2331
STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS
Sbjct: 481 STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS 540
Query: 2330 AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXV 2151
AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDM V
Sbjct: 541 AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDV 600
Query: 2150 NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRETPEDGGWHDL 1971
NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKK+DI+ LQQRETPE+ GWHDL
Sbjct: 601 NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKRDIRALQQRETPEEAGWHDL 660
Query: 1970 VAKGFXXXXXXXXXXXXXXXXXINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIP 1791
V+ GF INDLV ARLNPEEAYSETYTHCEIHPSLILGVCASIIP
Sbjct: 661 VSNGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSETYTHCEIHPSLILGVCASIIP 720
Query: 1790 FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL 1611
FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
Sbjct: 721 FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL 780
Query: 1610 PAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP 1431
PAGINAIVAIACYSGYNQEDSVIMNQS++DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP
Sbjct: 781 PAGINAIVAIACYSGYNQEDSVIMNQSAIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP 840
Query: 1430 DRGNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQ-SSRYTKRDHS 1254
DR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQD+AQGQ +SRYT+RDHS
Sbjct: 841 DRSNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDEAQGQAASRYTRRDHS 900
Query: 1253 TSLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 1074
SLRHSE GIVDQVLLTTNADGLRFVKVRVRS+RIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 901 ISLRHSENGIVDQVLLTTNADGLRFVKVRVRSIRIPQIGDKFSSRHGQKGTVGMTYTQED 960
Query: 1073 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 894
MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 961 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 1020
Query: 893 LHKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 714
LHKCGYQMRGFETMYNGHTGR+LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1021 LHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1080
Query: 713 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNS 534
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNS
Sbjct: 1081 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS 1140
Query: 533 FECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 417
FECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1179
>ref|XP_007025631.1| DNA-directed RNA polymerase family protein isoform 1 [Theobroma
cacao] gi|508780997|gb|EOY28253.1| DNA-directed RNA
polymerase family protein isoform 1 [Theobroma cacao]
Length = 1189
Score = 2235 bits (5792), Expect = 0.0
Identities = 1105/1177 (93%), Positives = 1132/1177 (96%), Gaps = 1/1177 (0%)
Frame = -1
Query: 3944 MDLEEEYDPSYNDDEE-EEITQEDAWTVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 3768
M+ + EYDP DDE+ EEITQEDAW VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MEDDSEYDPQLMDDEDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 3767 SADIEIRPESQHNPGHQADFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT 3588
SADIEIRPESQHNPGHQ+DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT
Sbjct: 61 SADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT 120
Query: 3587 YSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 3408
YSAPLYVDV+KRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG
Sbjct: 121 YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 180
Query: 3407 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSS 3228
ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPS+
Sbjct: 181 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPST 240
Query: 3227 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQ 3048
MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQ
Sbjct: 241 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQ 300
Query: 3047 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEY 2868
MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVG++
Sbjct: 301 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGDF 360
Query: 2867 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVK 2688
CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+
Sbjct: 361 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 420
Query: 2687 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 2508
YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
Sbjct: 421 SYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 480
Query: 2507 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 2328
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA
Sbjct: 481 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 540
Query: 2327 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVN 2148
AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVG+HR+PDM VN
Sbjct: 541 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVN 600
Query: 2147 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRETPEDGGWHDLV 1968
TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI LQQRE+PEDGGWHDLV
Sbjct: 601 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLV 660
Query: 1967 AKGFXXXXXXXXXXXXXXXXXINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPF 1788
AKGF INDLV AR+NPEEAYSETYTHCEIHPSLILGVCASIIPF
Sbjct: 661 AKGFIEYIDTEEEETTMISMTINDLVQARVNPEEAYSETYTHCEIHPSLILGVCASIIPF 720
Query: 1787 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 1608
PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
Sbjct: 721 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 780
Query: 1607 AGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 1428
AGINAIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD
Sbjct: 781 AGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 840
Query: 1427 RGNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQSSRYTKRDHSTS 1248
R NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+Q++AQGQ+SRY++RDHS S
Sbjct: 841 RANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQASRYSRRDHSIS 900
Query: 1247 LRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP 1068
LRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP
Sbjct: 901 LRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP 960
Query: 1067 WTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALH 888
WTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALH
Sbjct: 961 WTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALH 1020
Query: 887 KCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE 708
KCGYQMRGFETMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE
Sbjct: 1021 KCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE 1080
Query: 707 GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFE 528
GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFE
Sbjct: 1081 GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFE 1140
Query: 527 CRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 417
CRGCKNKTDIVQV+IPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 CRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLT 1177
>ref|XP_003589372.2| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
gi|657401188|gb|AES59623.2| DNA-directed RNA polymerase
subunit beta [Medicago truncatula]
Length = 1195
Score = 2232 bits (5784), Expect = 0.0
Identities = 1104/1179 (93%), Positives = 1132/1179 (96%), Gaps = 3/1179 (0%)
Frame = -1
Query: 3944 MDLEEEYD---PSYNDDEEEEITQEDAWTVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 3774
MDLEEE + +D+EEEITQEDAW VISAYFEEKGLVRQQLDSFDEFIQNTMQEIV
Sbjct: 3 MDLEEENEFDQQMEEEDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 62
Query: 3773 DESADIEIRPESQHNPGHQADFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRN 3594
DESADIEIRPESQHNPGHQ+DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRN
Sbjct: 63 DESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRN 122
Query: 3593 LTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTE 3414
LTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTE
Sbjct: 123 LTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTE 182
Query: 3413 LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPP 3234
LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPP
Sbjct: 183 LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPP 242
Query: 3233 SSMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSD 3054
S+MFVRMLSR SAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+D
Sbjct: 243 STMFVRMLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFAD 302
Query: 3053 TQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVG 2874
TQMMELLRPSLEEAFVIQNQQVALDYIGKRG+TVGVTKEKRIKYAK+ILQKEMLPHVGVG
Sbjct: 303 TQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKDILQKEMLPHVGVG 362
Query: 2873 EYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRD 2694
EYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRD
Sbjct: 363 EYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRD 422
Query: 2693 VKGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY 2514
V+GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY
Sbjct: 423 VRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY 482
Query: 2513 ASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVG 2334
ASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVG
Sbjct: 483 ASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVG 542
Query: 2333 SAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXX 2154
SAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCW+GIHRDPDM
Sbjct: 543 SAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVD 602
Query: 2153 VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRETPEDGGWHD 1974
VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI LQQRE+PEDGGWHD
Sbjct: 603 VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHSLQQRESPEDGGWHD 662
Query: 1973 LVAKGFXXXXXXXXXXXXXXXXXINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASII 1794
LV+KGF INDLV ARLNPEEAYS+TYTHCEIHPSLILGVCASII
Sbjct: 663 LVSKGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASII 722
Query: 1793 PFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQ 1614
PFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQ
Sbjct: 723 PFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQ 782
Query: 1613 LPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 1434
LPAGINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGR
Sbjct: 783 LPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 842
Query: 1433 PDRGNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQSSRYTKRDHS 1254
PDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTP++Q++ QGQ++RY+KRDHS
Sbjct: 843 PDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPLSQEEQQGQAARYSKRDHS 902
Query: 1253 TSLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 1074
SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 903 ISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 962
Query: 1073 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 894
MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 963 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 1022
Query: 893 LHKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 714
LHKCGYQMRGFETMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1023 LHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1082
Query: 713 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNS 534
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNS
Sbjct: 1083 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS 1142
Query: 533 FECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 417
FECRGCKNKTDIVQV+IPYACKLLFQELM+MAIAPRMLT
Sbjct: 1143 FECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLT 1181
>ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
max] gi|947088766|gb|KRH37431.1| hypothetical protein
GLYMA_09G066000 [Glycine max]
Length = 1192
Score = 2231 bits (5780), Expect = 0.0
Identities = 1106/1180 (93%), Positives = 1131/1180 (95%), Gaps = 4/1180 (0%)
Frame = -1
Query: 3944 MDLEEE--YDPSY--NDDEEEEITQEDAWTVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 3777
MDLEEE YD +D+EEEITQEDAW VISAYFEEKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MDLEEEQEYDEQMMEEEDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 3776 VDESADIEIRPESQHNPGHQADFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 3597
VDESADIEIRPESQHNPGHQ+DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR
Sbjct: 61 VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120
Query: 3596 NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 3417
NLTYSAPLYVDVSKRVIKKGHDGEEVTE QDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT
Sbjct: 121 NLTYSAPLYVDVSKRVIKKGHDGEEVTEAQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180
Query: 3416 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRP 3237
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRP
Sbjct: 181 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 240
Query: 3236 PSSMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 3057
PS+MFVRMLSRTS+KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS
Sbjct: 241 PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 300
Query: 3056 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 2877
TQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV
Sbjct: 301 YTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 360
Query: 2876 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 2697
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
Sbjct: 361 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420
Query: 2696 DVKGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 2517
DV+GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480
Query: 2516 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 2337
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
Sbjct: 481 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540
Query: 2336 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXX 2157
GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCW+GIHRDPDM
Sbjct: 541 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLKKLRRRV 600
Query: 2156 XVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRETPEDGGWH 1977
VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI LQQRE+PEDGGWH
Sbjct: 601 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWH 660
Query: 1976 DLVAKGFXXXXXXXXXXXXXXXXXINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASI 1797
DLV+KGF INDLV AR+NPE+AYS+TYTHCEIHPSLILGVCASI
Sbjct: 661 DLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEDAYSDTYTHCEIHPSLILGVCASI 720
Query: 1796 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1617
IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780
Query: 1616 QLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 1437
QLPAGINAIV+IACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781 QLPAGINAIVSIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840
Query: 1436 RPDRGNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQSSRYTKRDH 1257
RPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+Q++AQGQ+ RYT+RDH
Sbjct: 841 RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDH 900
Query: 1256 STSLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 1077
S SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
Sbjct: 901 SISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 960
Query: 1076 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 897
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK
Sbjct: 961 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 1020
Query: 896 ALHKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 717
ALHKCGYQMRGFETMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
Sbjct: 1021 ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 1080
Query: 716 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKN 537
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKN
Sbjct: 1081 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN 1140
Query: 536 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 417
SFECRGCKNKTDIVQV+IPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 SFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLT 1180
>ref|XP_011096303.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Sesamum
indicum]
Length = 1193
Score = 2230 bits (5779), Expect = 0.0
Identities = 1102/1179 (93%), Positives = 1131/1179 (95%), Gaps = 3/1179 (0%)
Frame = -1
Query: 3944 MDLEEEYDPSYND---DEEEEITQEDAWTVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 3774
M+ EE YD YN+ DE+EEITQEDAW VISAYFEEKGLVRQQLDSFDEFIQNTMQEIV
Sbjct: 1 MEEEEYYDQDYNEEEEDEDEEITQEDAWPVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 60
Query: 3773 DESADIEIRPESQHNPGHQADFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRN 3594
DE+ADIEIRPESQHNPGHQ +F ETIYKISFGQIYLSKPMMTESDGETATLFP+AARLRN
Sbjct: 61 DEAADIEIRPESQHNPGHQPEFAETIYKISFGQIYLSKPMMTESDGETATLFPRAARLRN 120
Query: 3593 LTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTE 3414
LTYSAPLYVDV+KRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTE
Sbjct: 121 LTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTE 180
Query: 3413 LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPP 3234
LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAE+QNRPP
Sbjct: 181 LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPP 240
Query: 3233 SSMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSD 3054
S+MFVRMLSR SAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+FSD
Sbjct: 241 STMFVRMLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFSD 300
Query: 3053 TQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVG 2874
TQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVG
Sbjct: 301 TQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVG 360
Query: 2873 EYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRD 2694
EYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRD
Sbjct: 361 EYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRD 420
Query: 2693 VKGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY 2514
V+ YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY
Sbjct: 421 VRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY 480
Query: 2513 ASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVG 2334
ASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVG
Sbjct: 481 ASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVG 540
Query: 2333 SAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXX 2154
SAAYPILEFLEEWGTENF+EISPAVIPQATKIFVNGCWVGIHR+PDM
Sbjct: 541 SAAYPILEFLEEWGTENFKEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTLRRLRRRVD 600
Query: 2153 VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRETPEDGGWHD 1974
VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI+ LQQRE+PEDGGWHD
Sbjct: 601 VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPEDGGWHD 660
Query: 1973 LVAKGFXXXXXXXXXXXXXXXXXINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASII 1794
LVAKGF I DLV+ARLNP EAYS+TYTHCEIHPSLILGVCASII
Sbjct: 661 LVAKGFIEYIDTEEEETTMISMTIGDLVNARLNPTEAYSDTYTHCEIHPSLILGVCASII 720
Query: 1793 PFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQ 1614
PFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQ
Sbjct: 721 PFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQ 780
Query: 1613 LPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 1434
LPAGINAIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGR
Sbjct: 781 LPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 840
Query: 1433 PDRGNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQSSRYTKRDHS 1254
PDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+ DDAQGQ++RYTKRDHS
Sbjct: 841 PDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISPDDAQGQAARYTKRDHS 900
Query: 1253 TSLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 1074
TSLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 901 TSLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 960
Query: 1073 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 894
MPWT+EGITPDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 961 MPWTLEGITPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKA 1020
Query: 893 LHKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 714
LHKCGYQMRGFETMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1021 LHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1080
Query: 713 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNS 534
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCE+CGLIAIANLKKNS
Sbjct: 1081 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCEQCGLIAIANLKKNS 1140
Query: 533 FECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 417
FECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1179
>ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Cicer
arietinum]
Length = 1194
Score = 2230 bits (5779), Expect = 0.0
Identities = 1102/1178 (93%), Positives = 1132/1178 (96%), Gaps = 2/1178 (0%)
Frame = -1
Query: 3944 MDLEEEYDPSYND--DEEEEITQEDAWTVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD 3771
+D E+EYD D D+EEEITQEDAW VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD
Sbjct: 3 LDEEQEYDQQMMDEEDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD 62
Query: 3770 ESADIEIRPESQHNPGHQADFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNL 3591
ESADIEIRPESQHNPGHQ+DF ETIYKISFGQIYLSKPMMTESDGET+TLFPKAARLRNL
Sbjct: 63 ESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETSTLFPKAARLRNL 122
Query: 3590 TYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL 3411
TYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTL+QNSEKDLTEL
Sbjct: 123 TYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLFQNSEKDLTEL 182
Query: 3410 GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPS 3231
GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPS
Sbjct: 183 GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPS 242
Query: 3230 SMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDT 3051
+MFVRMLSRTS+KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDT
Sbjct: 243 TMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDT 302
Query: 3050 QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGE 2871
QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAK+ILQ+EMLPHVGVGE
Sbjct: 303 QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKDILQREMLPHVGVGE 362
Query: 2870 YCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV 2691
YCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV
Sbjct: 363 YCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV 422
Query: 2690 KGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA 2511
+GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA
Sbjct: 423 RGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA 482
Query: 2510 STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS 2331
STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS
Sbjct: 483 STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS 542
Query: 2330 AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXV 2151
AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCW+GIHRDPDM V
Sbjct: 543 AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDV 602
Query: 2150 NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRETPEDGGWHDL 1971
NTEVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI LQQRE+PE+GGWHDL
Sbjct: 603 NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHSLQQRESPEEGGWHDL 662
Query: 1970 VAKGFXXXXXXXXXXXXXXXXXINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIP 1791
V+KGF INDLV ARLNPEEAYS+TYTHCEIHPSLILGVCASIIP
Sbjct: 663 VSKGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIP 722
Query: 1790 FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL 1611
FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
Sbjct: 723 FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL 782
Query: 1610 PAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP 1431
PAGINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP
Sbjct: 783 PAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP 842
Query: 1430 DRGNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQSSRYTKRDHST 1251
DR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTP++Q++AQGQ++RY+KRDHS
Sbjct: 843 DRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPLSQEEAQGQAARYSKRDHSI 902
Query: 1250 SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 1071
SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
Sbjct: 903 SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 962
Query: 1070 PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 891
PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL
Sbjct: 963 PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 1022
Query: 890 HKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 711
HKCGYQMRGFETMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
Sbjct: 1023 HKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 1082
Query: 710 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSF 531
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIAIANLKKNSF
Sbjct: 1083 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKNSF 1142
Query: 530 ECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 417
ECRGCKNKTDIVQV+IPYACKLLFQELM+MAIAPRMLT
Sbjct: 1143 ECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLT 1180
>ref|XP_014518479.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vigna radiata
var. radiata]
Length = 1194
Score = 2228 bits (5774), Expect = 0.0
Identities = 1103/1180 (93%), Positives = 1133/1180 (96%), Gaps = 4/1180 (0%)
Frame = -1
Query: 3944 MDLEEE--YDPSY--NDDEEEEITQEDAWTVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 3777
MDLEEE YD DD+E++ITQEDAW VISAYFEEKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MDLEEEQEYDQQMMEEDDDEDDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 3776 VDESADIEIRPESQHNPGHQADFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 3597
VDESADIEIRPESQHNPGHQ+DF ETIY+ISFGQIYLSKPMMTESDGETATLFPKAARLR
Sbjct: 61 VDESADIEIRPESQHNPGHQSDFAETIYRISFGQIYLSKPMMTESDGETATLFPKAARLR 120
Query: 3596 NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 3417
NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT
Sbjct: 121 NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180
Query: 3416 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRP 3237
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRP
Sbjct: 181 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRP 240
Query: 3236 PSSMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 3057
PS+MFVRMLSRTS+KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS
Sbjct: 241 PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 300
Query: 3056 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 2877
DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV
Sbjct: 301 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 360
Query: 2876 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 2697
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
Sbjct: 361 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420
Query: 2696 DVKGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 2517
DV+GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480
Query: 2516 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 2337
+ASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
Sbjct: 481 FASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540
Query: 2336 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXX 2157
GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCW+GIHRDPDM
Sbjct: 541 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRV 600
Query: 2156 XVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRETPEDGGWH 1977
VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKK+DI LQQRE+PE+GGWH
Sbjct: 601 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKRDIHALQQRESPEEGGWH 660
Query: 1976 DLVAKGFXXXXXXXXXXXXXXXXXINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASI 1797
DLV+KGF INDLV ARLNPEEAYS+TYTHCEIHPSLILGVCASI
Sbjct: 661 DLVSKGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASI 720
Query: 1796 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1617
IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780
Query: 1616 QLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 1437
QLPAGINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781 QLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840
Query: 1436 RPDRGNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQSSRYTKRDH 1257
RPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+Q++AQGQ+ RYT+RDH
Sbjct: 841 RPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDH 900
Query: 1256 STSLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 1077
S SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
Sbjct: 901 SISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 960
Query: 1076 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 897
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK
Sbjct: 961 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 1020
Query: 896 ALHKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 717
ALHKCGYQMRGFETMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
Sbjct: 1021 ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 1080
Query: 716 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKN 537
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKN
Sbjct: 1081 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN 1140
Query: 536 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 417
SFECRGCKNKTDIVQV+IPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 SFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLT 1180
>gb|KOM39913.1| hypothetical protein LR48_Vigan04g011100 [Vigna angularis]
Length = 1197
Score = 2228 bits (5774), Expect = 0.0
Identities = 1102/1182 (93%), Positives = 1130/1182 (95%), Gaps = 6/1182 (0%)
Frame = -1
Query: 3944 MDLEEEYD------PSYNDDEEEEITQEDAWTVISAYFEEKGLVRQQLDSFDEFIQNTMQ 3783
MDLEEE + D++E+EITQEDAW VISAYFEEKGLVRQQLDSFDEFIQNTMQ
Sbjct: 1 MDLEEEQEYEEQMMEDEEDEDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQ 60
Query: 3782 EIVDESADIEIRPESQHNPGHQADFLETIYKISFGQIYLSKPMMTESDGETATLFPKAAR 3603
EIVDESADIEIRPESQHNPGHQ+DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAAR
Sbjct: 61 EIVDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAAR 120
Query: 3602 LRNLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKD 3423
LRNLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKD
Sbjct: 121 LRNLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKD 180
Query: 3422 LTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQN 3243
LTELGECPYDQGGYF+INGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQN
Sbjct: 181 LTELGECPYDQGGYFVINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQN 240
Query: 3242 RPPSSMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYD 3063
RPPS+MFVRMLSRTS+KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYD
Sbjct: 241 RPPSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYD 300
Query: 3062 FSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHV 2883
FSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHV
Sbjct: 301 FSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHV 360
Query: 2882 GVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKL 2703
G+GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKL
Sbjct: 361 GIGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKL 420
Query: 2702 TRDVKGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNR 2523
TRDV+ YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNR
Sbjct: 421 TRDVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNR 480
Query: 2522 LTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYI 2343
LTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYI
Sbjct: 481 LTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYI 540
Query: 2342 TVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXX 2163
TVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCW+GIHRDPDM
Sbjct: 541 TVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRR 600
Query: 2162 XXXVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRETPEDGG 1983
VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI LQQRE+PE+GG
Sbjct: 601 RVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEEGG 660
Query: 1982 WHDLVAKGFXXXXXXXXXXXXXXXXXINDLVSARLNPEEAYSETYTHCEIHPSLILGVCA 1803
WHDLV+KGF INDLV AR+NPEEAYS+TYTHCEIHPSLILGVCA
Sbjct: 661 WHDLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEEAYSDTYTHCEIHPSLILGVCA 720
Query: 1802 SIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLH 1623
SIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLH
Sbjct: 721 SIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLH 780
Query: 1622 FRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKED 1443
FRQLPAGINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKED
Sbjct: 781 FRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKED 840
Query: 1442 FGRPDRGNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQSSRYTKR 1263
FGRPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+Q++AQGQ+ RYT+R
Sbjct: 841 FGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRR 900
Query: 1262 DHSTSLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 1083
DHS SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT
Sbjct: 901 DHSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 960
Query: 1082 QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI 903
QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI
Sbjct: 961 QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI 1020
Query: 902 SKALHKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 723
SKALHKCGYQMRGFETMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT
Sbjct: 1021 SKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 1080
Query: 722 RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLK 543
RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLK
Sbjct: 1081 RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEQCGLIAIANLK 1140
Query: 542 KNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 417
KNSFECRGCKNKTDIVQV IPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 KNSFECRGCKNKTDIVQVFIPYACKLLFQELMAMAIAPRMLT 1182
>gb|KHN35874.1| DNA-directed RNA polymerase II subunit RPB2 [Glycine soja]
Length = 1192
Score = 2228 bits (5774), Expect = 0.0
Identities = 1105/1180 (93%), Positives = 1130/1180 (95%), Gaps = 4/1180 (0%)
Frame = -1
Query: 3944 MDLEEE--YDPSY--NDDEEEEITQEDAWTVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 3777
MDLEEE YD +D+EEEITQEDAW VISAYFEEKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MDLEEEQEYDEQMMEEEDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 3776 VDESADIEIRPESQHNPGHQADFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 3597
VDESADIEIRPESQHNPGHQ+DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR
Sbjct: 61 VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120
Query: 3596 NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 3417
NLTYSAPLYVDVSKRVIKKGHDGEEVTE QDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT
Sbjct: 121 NLTYSAPLYVDVSKRVIKKGHDGEEVTEAQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180
Query: 3416 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRP 3237
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRP
Sbjct: 181 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 240
Query: 3236 PSSMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 3057
PS+MFVRMLSRTS+KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS
Sbjct: 241 PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 300
Query: 3056 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 2877
TQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV
Sbjct: 301 YTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 360
Query: 2876 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 2697
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
Sbjct: 361 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420
Query: 2696 DVKGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 2517
DV+GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480
Query: 2516 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 2337
YASTLSHLRRLNSPIGREGK AKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
Sbjct: 481 YASTLSHLRRLNSPIGREGKSAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540
Query: 2336 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXX 2157
GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCW+GIHRDPDM
Sbjct: 541 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLKKLRRRV 600
Query: 2156 XVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRETPEDGGWH 1977
VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI LQQRE+PEDGGWH
Sbjct: 601 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWH 660
Query: 1976 DLVAKGFXXXXXXXXXXXXXXXXXINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASI 1797
DLV+KGF INDLV AR+NPE+AYS+TYTHCEIHPSLILGVCASI
Sbjct: 661 DLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEDAYSDTYTHCEIHPSLILGVCASI 720
Query: 1796 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1617
IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780
Query: 1616 QLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 1437
QLPAGINAIV+IACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781 QLPAGINAIVSIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840
Query: 1436 RPDRGNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQSSRYTKRDH 1257
RPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+Q++AQGQ+ RYT+RDH
Sbjct: 841 RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDH 900
Query: 1256 STSLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 1077
S SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
Sbjct: 901 SISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 960
Query: 1076 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 897
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK
Sbjct: 961 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 1020
Query: 896 ALHKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 717
ALHKCGYQMRGFETMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
Sbjct: 1021 ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 1080
Query: 716 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKN 537
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKN
Sbjct: 1081 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN 1140
Query: 536 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 417
SFECRGCKNKTDIVQV+IPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 SFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLT 1180
>ref|XP_014501986.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Vigna
radiata var. radiata]
Length = 1195
Score = 2228 bits (5773), Expect = 0.0
Identities = 1104/1180 (93%), Positives = 1131/1180 (95%), Gaps = 4/1180 (0%)
Frame = -1
Query: 3944 MDLEEE--YDPSYNDDEEEE--ITQEDAWTVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 3777
MDLEEE Y+ +DEE+E ITQEDAW VISAYFEEKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MDLEEEQEYEEQMMEDEEDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 3776 VDESADIEIRPESQHNPGHQADFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 3597
VDESADIEIRPESQHNPGHQ+DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR
Sbjct: 61 VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120
Query: 3596 NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 3417
NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT
Sbjct: 121 NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180
Query: 3416 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRP 3237
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRP
Sbjct: 181 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 240
Query: 3236 PSSMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 3057
PS+MFVRMLSRTS+KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS
Sbjct: 241 PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 300
Query: 3056 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 2877
DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVG+
Sbjct: 301 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGI 360
Query: 2876 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 2697
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
Sbjct: 361 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420
Query: 2696 DVKGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 2517
DV+ YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421 DVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480
Query: 2516 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 2337
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
Sbjct: 481 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540
Query: 2336 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXX 2157
GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCW+GIHRDPDM
Sbjct: 541 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRV 600
Query: 2156 XVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRETPEDGGWH 1977
VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI LQQRE+PE+GGWH
Sbjct: 601 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEEGGWH 660
Query: 1976 DLVAKGFXXXXXXXXXXXXXXXXXINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASI 1797
DLV+KG+ INDLV AR+NPEEAYS+TYTHCEIHPSLILGVCASI
Sbjct: 661 DLVSKGYIEYIDTEEEETTMISMTINDLVQARINPEEAYSDTYTHCEIHPSLILGVCASI 720
Query: 1796 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1617
IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780
Query: 1616 QLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 1437
QLPAGINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781 QLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840
Query: 1436 RPDRGNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQSSRYTKRDH 1257
RPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+Q++AQGQ+ RYT+RDH
Sbjct: 841 RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDH 900
Query: 1256 STSLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 1077
S SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
Sbjct: 901 SISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 960
Query: 1076 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 897
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK
Sbjct: 961 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 1020
Query: 896 ALHKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 717
ALHKCGYQMRGFETMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
Sbjct: 1021 ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 1080
Query: 716 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKN 537
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKN
Sbjct: 1081 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEQCGLIAIANLKKN 1140
Query: 536 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 417
SFECRGCKNKTDIVQV IPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 SFECRGCKNKTDIVQVFIPYACKLLFQELMAMAIAPRMLT 1180
>ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
max] gi|947063175|gb|KRH12436.1| hypothetical protein
GLYMA_15G172100 [Glycine max]
Length = 1193
Score = 2227 bits (5772), Expect = 0.0
Identities = 1105/1180 (93%), Positives = 1129/1180 (95%), Gaps = 4/1180 (0%)
Frame = -1
Query: 3944 MDLEEE--YDPSY--NDDEEEEITQEDAWTVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 3777
MDLEEE YD DD+EEEITQEDAW VISAYFEEKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MDLEEEQEYDEQMMEEDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 3776 VDESADIEIRPESQHNPGHQADFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 3597
VDESADIEIRPESQHNPGHQ+DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR
Sbjct: 61 VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120
Query: 3596 NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 3417
NLTYSAPLYVDVSKRV+KKGHDGEEVTETQD TKVFIGKVPIMLRSSYCTLYQNSEKDLT
Sbjct: 121 NLTYSAPLYVDVSKRVVKKGHDGEEVTETQDLTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180
Query: 3416 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRP 3237
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRP
Sbjct: 181 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 240
Query: 3236 PSSMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 3057
PS+MFVRMLSRTS+KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS
Sbjct: 241 PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 300
Query: 3056 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 2877
DT MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV
Sbjct: 301 DTLMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 360
Query: 2876 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 2697
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
Sbjct: 361 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420
Query: 2696 DVKGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 2517
DV+GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480
Query: 2516 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 2337
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
Sbjct: 481 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540
Query: 2336 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXX 2157
GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCW+GIHRDPDM
Sbjct: 541 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRV 600
Query: 2156 XVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRETPEDGGWH 1977
VNTEVGVVRDI LKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI LQQRE+PEDGGWH
Sbjct: 601 DVNTEVGVVRDIILKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWH 660
Query: 1976 DLVAKGFXXXXXXXXXXXXXXXXXINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASI 1797
DLV+KGF INDLV AR+NPE+AY+ TYTHCEIHPSLILGVCASI
Sbjct: 661 DLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEDAYAGTYTHCEIHPSLILGVCASI 720
Query: 1796 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1617
IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780
Query: 1616 QLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 1437
QLPAGINAIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840
Query: 1436 RPDRGNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQSSRYTKRDH 1257
RPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+Q++AQGQ+ RYT+RDH
Sbjct: 841 RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDH 900
Query: 1256 STSLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 1077
S SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
Sbjct: 901 SISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 960
Query: 1076 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 897
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK
Sbjct: 961 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 1020
Query: 896 ALHKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 717
ALHKCGYQMRGFETMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
Sbjct: 1021 ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 1080
Query: 716 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKN 537
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKN
Sbjct: 1081 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN 1140
Query: 536 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 417
SFECRGCKNKTDIVQV+IPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 SFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLT 1180
>gb|KHN28836.1| DNA-directed RNA polymerase II subunit RPB2 [Glycine soja]
Length = 1193
Score = 2227 bits (5770), Expect = 0.0
Identities = 1105/1180 (93%), Positives = 1129/1180 (95%), Gaps = 4/1180 (0%)
Frame = -1
Query: 3944 MDLEEE--YDPSY--NDDEEEEITQEDAWTVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 3777
MDLEEE YD DD+EEEITQEDAW VISAYFEEKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MDLEEEQEYDEQMMEEDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 3776 VDESADIEIRPESQHNPGHQADFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 3597
VDESADIEIRPESQHNPGHQ+DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR
Sbjct: 61 VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120
Query: 3596 NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 3417
NLTYSAPLYVDVSKRV+KKGHDGEEVTETQD TKVFIGKVPIMLRSSYCTLYQNSEKDLT
Sbjct: 121 NLTYSAPLYVDVSKRVVKKGHDGEEVTETQDLTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180
Query: 3416 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRP 3237
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRP
Sbjct: 181 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 240
Query: 3236 PSSMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 3057
PS+MFVRMLSRTS+KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS
Sbjct: 241 PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 300
Query: 3056 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 2877
TQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV
Sbjct: 301 YTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 360
Query: 2876 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 2697
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
Sbjct: 361 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420
Query: 2696 DVKGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 2517
DV+GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480
Query: 2516 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 2337
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
Sbjct: 481 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540
Query: 2336 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXX 2157
GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCW+GIHRDPDM
Sbjct: 541 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRV 600
Query: 2156 XVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRETPEDGGWH 1977
VNTEVGVVRDI LKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI LQQRE+PEDGGWH
Sbjct: 601 DVNTEVGVVRDIILKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWH 660
Query: 1976 DLVAKGFXXXXXXXXXXXXXXXXXINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASI 1797
DLV+KGF INDLV AR+NPE+AY+ TYTHCEIHPSLILGVCASI
Sbjct: 661 DLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEDAYAGTYTHCEIHPSLILGVCASI 720
Query: 1796 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1617
IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780
Query: 1616 QLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 1437
QLPAGINAIVAIACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840
Query: 1436 RPDRGNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQSSRYTKRDH 1257
RPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+Q++AQGQ+ RYT+RDH
Sbjct: 841 RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDH 900
Query: 1256 STSLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 1077
S SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
Sbjct: 901 SISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 960
Query: 1076 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 897
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK
Sbjct: 961 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 1020
Query: 896 ALHKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 717
ALHKCGYQMRGFETMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
Sbjct: 1021 ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 1080
Query: 716 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKN 537
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKN
Sbjct: 1081 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN 1140
Query: 536 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 417
SFECRGCKNKTDIVQV+IPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 SFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLT 1180