BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046466
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26082.3| unnamed protein product [Vitis vinifera]              131   6e-29
ref|XP_002276230.1| PREDICTED: pentatricopeptide repeat-containi...   131   6e-29
ref|XP_002330363.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26
ref|XP_004165782.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25
ref|XP_004143199.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25

>emb|CBI26082.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score =  131 bits (329), Expect = 6e-29
 Identities = 63/100 (63%), Positives = 84/100 (84%), Gaps = 1/100 (1%)
 Frame = +1

Query: 16  SLGVFETMLKTHVLPNSFTFTTVINACSILSDVENGRKIHAHVEIIGLKDDIGVCTSLIN 195
           +L +F  ML++ VLPN+FTF TV+NACS+L+D+  G+KIH+HVE+ G++ ++ VC+SLI+
Sbjct: 112 ALLIFCKMLESWVLPNAFTFATVVNACSMLADLRTGQKIHSHVEMFGVQCNLVVCSSLID 171

Query: 196 MYGKCNDV-EARKVFDTMVYRNVVSWTSMIAVYVQNALGE 312
           MYGKCN+V +AR+VFD M YRNVVSWTSMI  Y QNALGE
Sbjct: 172 MYGKCNNVDDARRVFDGMDYRNVVSWTSMITAYGQNALGE 211


>ref|XP_002276230.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g15720-like [Vitis vinifera]
          Length = 606

 Score =  131 bits (329), Expect = 6e-29
 Identities = 63/100 (63%), Positives = 84/100 (84%), Gaps = 1/100 (1%)
 Frame = +1

Query: 16  SLGVFETMLKTHVLPNSFTFTTVINACSILSDVENGRKIHAHVEIIGLKDDIGVCTSLIN 195
           +L +F  ML++ VLPN+FTF TV+NACS+L+D+  G+KIH+HVE+ G++ ++ VC+SLI+
Sbjct: 112 ALLIFCKMLESWVLPNAFTFATVVNACSMLADLRTGQKIHSHVEMFGVQCNLVVCSSLID 171

Query: 196 MYGKCNDV-EARKVFDTMVYRNVVSWTSMIAVYVQNALGE 312
           MYGKCN+V +AR+VFD M YRNVVSWTSMI  Y QNALGE
Sbjct: 172 MYGKCNNVDDARRVFDGMDYRNVVSWTSMITAYGQNALGE 211


>ref|XP_002330363.1| predicted protein [Populus trichocarpa] gi|222871567|gb|EEF08698.1|
           predicted protein [Populus trichocarpa]
          Length = 584

 Score =  120 bits (302), Expect = 9e-26
 Identities = 58/103 (56%), Positives = 79/103 (76%), Gaps = 1/103 (0%)
 Frame = +1

Query: 4   VWLYSLGVFETMLKTHVLPNSFTFTTVINACSILSDVENGRKIHAHVEIIGLKDDIGVCT 183
           +WLY+      M ++ V PN FT  TVIN+CSIL+D++ G+ +HAHV+I+GL+ ++ VC+
Sbjct: 92  LWLYT-----KMSESEVSPNGFTLATVINSCSILADLKTGKMVHAHVQILGLQGNLVVCS 146

Query: 184 SLINMYGKCNDVE-ARKVFDTMVYRNVVSWTSMIAVYVQNALG 309
           SL++MYGKCNDV+ AR VFD+M  RNVVSWT+MIA Y QN  G
Sbjct: 147 SLVDMYGKCNDVDGARMVFDSMSCRNVVSWTAMIAGYAQNGKG 189


>ref|XP_004165782.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g15720-like [Cucumis sativus]
          Length = 603

 Score =  119 bits (297), Expect = 3e-25
 Identities = 59/100 (59%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
 Frame = +1

Query: 16  SLGVFETMLKTHVLPNSFTFTTVINACSILSDVENGRKIHAHVEIIGLKDDIGVCTSLIN 195
           +L +F  ML++ V+PN FTF T I ACSILS++ +G   HAHVEI G   +I VC+SLI+
Sbjct: 109 ALFLFGEMLRSPVVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLID 168

Query: 196 MYGKCND-VEARKVFDTMVYRNVVSWTSMIAVYVQNALGE 312
           MYGKCND V+AR VF++M  +N+VSWTSMIA Y QNA G+
Sbjct: 169 MYGKCNDVVKARGVFNSMSCKNIVSWTSMIAAYAQNAHGD 208


>ref|XP_004143199.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g15720-like [Cucumis sativus]
          Length = 603

 Score =  119 bits (297), Expect = 3e-25
 Identities = 59/100 (59%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
 Frame = +1

Query: 16  SLGVFETMLKTHVLPNSFTFTTVINACSILSDVENGRKIHAHVEIIGLKDDIGVCTSLIN 195
           +L +F  ML++ V+PN FTF T I ACSILS++ +G   HAHVEI G   +I VC+SLI+
Sbjct: 109 ALFLFGEMLRSPVVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLID 168

Query: 196 MYGKCND-VEARKVFDTMVYRNVVSWTSMIAVYVQNALGE 312
           MYGKCND V+AR VF++M  +N+VSWTSMIA Y QNA G+
Sbjct: 169 MYGKCNDVVKARGVFNSMSCKNIVSWTSMIAAYAQNAHGD 208