BLASTX nr result

ID: Coptis25_contig00046462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046462
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282381.1| PREDICTED: uncharacterized protein LOC100268...    79   4e-13
ref|XP_002514141.1| methyltransferase, putative [Ricinus communi...    78   9e-13
ref|XP_002309222.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_004141050.1| PREDICTED: uncharacterized protein LOC101203...    71   8e-11
gb|AFK34232.1| unknown [Medicago truncatula]                           58   7e-07

>ref|XP_002282381.1| PREDICTED: uncharacterized protein LOC100268021 [Vitis vinifera]
           gi|297738680|emb|CBI27925.3| unnamed protein product
           [Vitis vinifera]
          Length = 315

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 54/109 (49%), Positives = 67/109 (61%), Gaps = 16/109 (14%)
 Frame = +2

Query: 14  MAYRLGSFTLPQTFPILAGVSIPCTLSI---------FSLSTKLHKW--RAPPRRLFLGI 160
           MA RL + TL Q  PILAGV   CT S+         FS S K  K   R  PRRL LG+
Sbjct: 1   MASRLAA-TLHQRLPILAGV---CTASVAFTVDSVPRFSKSLKKLKGKRRVVPRRLLLGL 56

Query: 161 GTSFFAQFINM--ASGSGEKSFLASARQKGV---IEEVFKDVEWPEQFP 292
           G SF+AQF++M  + G G K  +ASARQ+G    +E++ K+VEWPEQFP
Sbjct: 57  GASFWAQFVSMSGSGGIGGKFLVASARQQGASSPVEQILKNVEWPEQFP 105


>ref|XP_002514141.1| methyltransferase, putative [Ricinus communis]
           gi|223546597|gb|EEF48095.1| methyltransferase, putative
           [Ricinus communis]
          Length = 303

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 44/89 (49%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
 Frame = +2

Query: 41  LPQTFPILAGVSIPCTLSIFSLSTKLHKWRA-----PPRRLFLGIGTSFFAQFINMASGS 205
           L Q   +LA V   C      LSTK H W+       PRRL LG+G SF+AQ ++    +
Sbjct: 9   LQQKLSVLATV---CPNHYSPLSTKAH-WKLNTRFKAPRRLVLGLGASFWAQIMSTVGVN 64

Query: 206 GEKSFLASARQKGVIEEVFKDVEWPEQFP 292
           G KSF+ASAR+KG +EEV K+VEWPE+FP
Sbjct: 65  GGKSFIASAREKGAVEEVLKNVEWPEKFP 93


>ref|XP_002309222.1| predicted protein [Populus trichocarpa] gi|222855198|gb|EEE92745.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
 Frame = +2

Query: 47  QTFPILAGVSIPCTL------SIFSLSTKLHKWRA---PPRRLFLGIGTSFFAQFINMAS 199
           Q  P+LA +  PC L      S  S+S    KW      PRRL LG+G SF++QF++MA 
Sbjct: 12  QRLPVLASL-YPCRLPTIHTRSANSVSESQRKWNIGFKAPRRLVLGLGASFWSQFMSMAG 70

Query: 200 GSGEKSFLASARQKGVIEEVFKDVEWPEQFP 292
            +  K  +A A+Q+ VIEEV K+V+WP+QFP
Sbjct: 71  RARSKHLIALAKQEVVIEEVLKNVDWPQQFP 101


>ref|XP_004141050.1| PREDICTED: uncharacterized protein LOC101203969 [Cucumis sativus]
           gi|449488025|ref|XP_004157919.1| PREDICTED:
           uncharacterized protein LOC101223479 [Cucumis sativus]
          Length = 305

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 48/98 (48%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
 Frame = +2

Query: 14  MAYRLGSFTLPQTFPILAGVSIPCTLSIFSLSTKLHKWRAPP---RRLFLGIGTSFFAQF 184
           MA R+G   L +  PI   V+     S  S +T L +W A     RRL LG+G SF+A F
Sbjct: 1   MASRIG-LNLHRGIPISL-VAPSAVWSANSAATSLKRWSAGGKHRRRLVLGLGISFWAPF 58

Query: 185 INMASGS--GEKSFLASARQKGVIEEVFKDVEWPEQFP 292
           +NM SGS  G KSF+ASAR K  +EE+ K+VEWPE+FP
Sbjct: 59  MNM-SGSLVGAKSFVASARPKNSVEEILKNVEWPEKFP 95


>gb|AFK34232.1| unknown [Medicago truncatula]
          Length = 308

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
 Frame = +2

Query: 2   RYPTMAYRLGSFTLPQTFPILAGVSIPCTLSIFSLSTKLHK-WRAPPRRLFLGIG-TSFF 175
           R P M+    S   P+T  ++   S  C+L        L+K ++  PRR+ LG G +SF 
Sbjct: 8   RLPVMSCHCASTPHPRTVNVVGSSS--CSL--------LNKTFKNAPRRMLLGFGASSFL 57

Query: 176 AQFINMASGSGEKSFLASARQKG--VIEEVFKDVEWPEQFP 292
           + FI   S SG KSF+ASA+      ++++ K+VEWPEQFP
Sbjct: 58  SHFITNMSASGFKSFIASAKITAGPSVDQILKNVEWPEQFP 98


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