BLASTX nr result

ID: Coptis25_contig00046424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046424
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318015.1| repressor, antagonist of e2f-dp complex [Pop...   100   1e-19
ref|XP_004157798.1| PREDICTED: E2F transcription factor-like E2F...   100   2e-19
ref|XP_004152458.1| PREDICTED: E2F transcription factor-like E2F...   100   2e-19
ref|XP_002321561.1| repressor, antagonist of e2f-dp complex [Pop...    97   2e-18
ref|XP_003525157.1| PREDICTED: E2F transcription factor-like E2F...    92   3e-17

>ref|XP_002318015.1| repressor, antagonist of e2f-dp complex [Populus trichocarpa]
           gi|222858688|gb|EEE96235.1| repressor, antagonist of
           e2f-dp complex [Populus trichocarpa]
          Length = 385

 Score =  100 bits (249), Expect = 1e-19
 Identities = 59/118 (50%), Positives = 73/118 (61%), Gaps = 16/118 (13%)
 Frame = -2

Query: 306 GFAGIPKALHVLKEEGFTDN--------NSFSKIWDGDE--------KPMSFKIEERKFN 175
           GFA +PKAL  LKEEG  DN        N+  K+ D DE         P +    E    
Sbjct: 85  GFAAVPKALQELKEEGLRDNVNTIDKQSNNSVKVADDDEDEDDDSDSNPNTGSQNENSGI 144

Query: 174 LKRSLSSKLDNRREKSLAALTQNFVKLFICRDSNLISLDEAAKFLLGEMHDSSQMRTK 1
           +K + +S+ D+RREKSL  LTQNFVKLF+C ++NLISLDE+AK LLG+ H SS MRTK
Sbjct: 145 IKSTAASRFDHRREKSLGLLTQNFVKLFVCFNANLISLDESAKLLLGDGHKSSIMRTK 202


>ref|XP_004157798.1| PREDICTED: E2F transcription factor-like E2FE-like [Cucumis
           sativus]
          Length = 381

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 59/114 (51%), Positives = 70/114 (61%), Gaps = 12/114 (10%)
 Frame = -2

Query: 306 GFAGIPKALHVLKEEGFTDN------NSFSKIWDGDEK------PMSFKIEERKFNLKRS 163
           GF  IPKAL  LKEEG  +N      N ++K+ D +++      P   +          S
Sbjct: 88  GFGAIPKALQDLKEEGLRENCSASDGNDYAKVSDDEDEDERFSNPTGSQTSTAAVPKSSS 147

Query: 162 LSSKLDNRREKSLAALTQNFVKLFICRDSNLISLDEAAKFLLGEMHDSSQMRTK 1
            S K DNRREKSLA LTQNFVKLFIC   N+ISLDEAAK LLG+ H+SS MRTK
Sbjct: 148 SSLKADNRREKSLALLTQNFVKLFICSHVNMISLDEAAKLLLGDGHNSSIMRTK 201


>ref|XP_004152458.1| PREDICTED: E2F transcription factor-like E2FE-like [Cucumis
           sativus]
          Length = 381

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 59/114 (51%), Positives = 70/114 (61%), Gaps = 12/114 (10%)
 Frame = -2

Query: 306 GFAGIPKALHVLKEEGFTDN------NSFSKIWDGDEK------PMSFKIEERKFNLKRS 163
           GF  IPKAL  LKEEG  +N      N ++K+ D +++      P   +          S
Sbjct: 88  GFGAIPKALQDLKEEGLRENCSASDGNDYAKVSDDEDEDERFSNPTGSQTSTAAVPKSSS 147

Query: 162 LSSKLDNRREKSLAALTQNFVKLFICRDSNLISLDEAAKFLLGEMHDSSQMRTK 1
            S K DNRREKSLA LTQNFVKLFIC   N+ISLDEAAK LLG+ H+SS MRTK
Sbjct: 148 SSLKADNRREKSLALLTQNFVKLFICSHVNMISLDEAAKLLLGDGHNSSIMRTK 201


>ref|XP_002321561.1| repressor, antagonist of e2f-dp complex [Populus trichocarpa]
           gi|222868557|gb|EEF05688.1| repressor, antagonist of
           e2f-dp complex [Populus trichocarpa]
          Length = 384

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 57/118 (48%), Positives = 71/118 (60%), Gaps = 16/118 (13%)
 Frame = -2

Query: 306 GFAGIPKALHVLKEEGFTDN--------NSFSKIW--------DGDEKPMSFKIEERKFN 175
           GFA +PKAL  LKEEG  DN        N+ +K+         D D  P +    E    
Sbjct: 85  GFASVPKALQDLKEEGLRDNVNTIDRQSNNSAKVANDDEDEDDDSDSNPNTGSQNENSSI 144

Query: 174 LKRSLSSKLDNRREKSLAALTQNFVKLFICRDSNLISLDEAAKFLLGEMHDSSQMRTK 1
           +K    S+ D+RREKSL  LTQNFVKLF+C ++NLISLDE+AK LLG+ H+ S MRTK
Sbjct: 145 IKSMAVSRSDHRREKSLGLLTQNFVKLFVCSNANLISLDESAKLLLGDGHNLSIMRTK 202


>ref|XP_003525157.1| PREDICTED: E2F transcription factor-like E2FE-like [Glycine max]
          Length = 381

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 57/120 (47%), Positives = 70/120 (58%), Gaps = 18/120 (15%)
 Frame = -2

Query: 306 GFAGIPKALHVLKEEGFTDNNSF--------SKIWDGDEKP----------MSFKIEERK 181
           GF  IP  L  LKEEG  DN++F         K+ D ++             S K+    
Sbjct: 81  GFVAIPHTLQELKEEGLKDNSNFLRGSGNDNDKVSDDEDDEETLSNPATGSQSDKLNPNS 140

Query: 180 FNLKRSLSSKLDNRREKSLAALTQNFVKLFICRDSNLISLDEAAKFLLGEMHDSSQMRTK 1
             L +SL  K +NRREKSLA LTQNFVKLF+C +  LISLDEAAK LLG+ H++S MRTK
Sbjct: 141 STLTKSL--KNENRREKSLALLTQNFVKLFVCSNVELISLDEAAKLLLGDAHNTSVMRTK 198


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