BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046420
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]      66   3e-09
emb|CAN81986.1| hypothetical protein VITISV_001568 [Vitis vinifera]    60   1e-07
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]       50   3e-07
ref|XP_003560350.1| PREDICTED: uncharacterized protein LOC100835...    54   8e-07
gb|ADB85290.1| putative retrotransposon protein [Phyllostachys e...    58   9e-07

>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 9/87 (10%)
 Frame = -1

Query: 288  GVGAVLIQEGKPIAFFSKALGPKALGFLHL*ERVVAIVMAV---------SRLLGFYYEI 136
            G+GAVL+Q+  PI + S+ALGP+        + ++A+V AV         S+L+G+ YEI
Sbjct: 991  GIGAVLMQDNHPICYISRALGPRHQALSVYEKELMAVVHAVTTPFQHMWLSKLMGYTYEI 1050

Query: 135  KYKRGKENTATDALLSSGGTKFLSYPL 55
            +YK+GKEN A DAL    G + LS  L
Sbjct: 1051 QYKQGKENHAADALSRVTGAQLLSITL 1077


>emb|CAN81986.1| hypothetical protein VITISV_001568 [Vitis vinifera]
          Length = 672

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 13/81 (16%)
 Frame = -1

Query: 297 SVRGVGAVLIQEGKPIAFFSKALGPKALGFLHL*ERVVAIVMA-------------VSRL 157
           S +G+GAVL+QEG PIA+ SKAL  +        + ++AI+MA             V++L
Sbjct: 29  SGQGIGAVLMQEGHPIAYISKALSDRFQTLSTYEKEMLAILMAIKKRVTTPTQQAWVAKL 88

Query: 156 LGFYYEIKYKRGKENTATDAL 94
           + + YEI+YK+GKEN A DAL
Sbjct: 89  MQYDYEIRYKQGKENVAADAL 109


>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
          Length = 2396

 Score = 50.4 bits (119), Expect(2) = 3e-07
 Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 38/106 (35%)
 Frame = -1

Query: 297  SVRGVGAVLIQEGKPIAFFSKALGPKALGFLHL*ERVVAIVMAV---------------- 166
            S  GVGAVL+Q G P+AF SKALGPK  G     +  +AI++A+                
Sbjct: 944  SYYGVGAVLMQSGHPLAFLSKALGPKNQGLSTYEKEYMAIILAIAQWRSYLQLAEFIIYT 1003

Query: 165  ----------------------SRLLGFYYEIKYKRGKENTATDAL 94
                                  ++L G  Y+I Y++G +N A DAL
Sbjct: 1004 DHRSLAQLNEQRLHTIWQQKMYTKLAGLQYKIVYRKGVDNGAADAL 1049



 Score = 28.9 bits (63), Expect(2) = 3e-07
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 98   LS*VVEEQSSCHILSAVQPHWMKEVILSYEK 6
            LS  V+E S C  +S   P W++EV+  Y+K
Sbjct: 1049 LSRKVQEDSHCCAISHSVPTWLQEVVEGYDK 1079


>ref|XP_003560350.1| PREDICTED: uncharacterized protein LOC100835480 [Brachypodium
           distachyon]
          Length = 899

 Score = 54.3 bits (129), Expect(2) = 8e-07
 Identities = 37/103 (35%), Positives = 48/103 (46%), Gaps = 38/103 (36%)
 Frame = -1

Query: 288 GVGAVLIQEGKPIAFFSKALGPKALGFLHL*ERVVAIVMAVS------------------ 163
           GVGAVL+Q+G PIAF SKALG K        +  +AI+MA+                   
Sbjct: 384 GVGAVLMQQGHPIAFMSKALGSKNKTLSTYDKECLAILMAIDKWKSYLQSGEFLIYTDHR 443

Query: 162 --------------------RLLGFYYEIKYKRGKENTATDAL 94
                               +LLGF+Y+I YK+G EN+A DAL
Sbjct: 444 SLCQLGDHKANTPMQQKAFFKLLGFHYKIVYKKGVENSAADAL 486



 Score = 23.5 bits (49), Expect(2) = 8e-07
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 59  LSAVQPHWMKEVILSYEK 6
           LS VQP W++ ++  Y K
Sbjct: 498 LSTVQPRWLEIIVEGYAK 515


>gb|ADB85290.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 592

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 38/103 (36%)
 Frame = -1

Query: 288 GVGAVLIQEGKPIAFFSKALGPKALGFLHL*ERVVAIVMAVS------------------ 163
           G+GAVL+Q G+PI+F SKA+GPKA       +  +AI+ A+                   
Sbjct: 127 GIGAVLMQGGRPISFMSKAIGPKAAALSTYDKEALAILEAIKMWKHYFAGSTLIIRTDQQ 186

Query: 162 --------------------RLLGFYYEIKYKRGKENTATDAL 94
                               +LLG+ Y+++YKRG+EN ATDAL
Sbjct: 187 SLKYMQEQIIIEGVQHKLLVKLLGYNYKVEYKRGRENKATDAL 229