BLASTX nr result

ID: Coptis25_contig00046400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046400
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510484.1| protein with unknown function [Ricinus commu...   149   2e-34
ref|XP_003631896.1| PREDICTED: probable LRR receptor-like serine...   149   2e-34
ref|XP_002306906.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
ref|XP_003527668.1| PREDICTED: probable LRR receptor-like serine...   145   3e-33
ref|XP_003523555.1| PREDICTED: probable LRR receptor-like serine...   145   4e-33

>ref|XP_002510484.1| protein with unknown function [Ricinus communis]
            gi|223551185|gb|EEF52671.1| protein with unknown function
            [Ricinus communis]
          Length = 1135

 Score =  149 bits (376), Expect = 2e-34
 Identities = 74/124 (59%), Positives = 88/124 (70%)
 Frame = -3

Query: 372  NDPSAFAMNENLCGKPLYKNCENVNKANRRRKMKKLLLMIGVAIAGALLVSLCCCCYIFS 193
            NDPS FAMN  LCGKPL + C NV    R RK K+L L+IGV +AG  L+ LCCC YI+S
Sbjct: 725  NDPSVFAMNGELCGKPLGRECTNV----RNRKRKRLFLLIGVTVAGGFLLLLCCCGYIYS 780

Query: 192  LLRWRKQLQAAASGEKKRSPARTXXXXXXXXXXXXXXGPKMIMFNNKLTFAETVEATRQF 13
            LLRWRK+L+   +GEKK SPART              GPK++MFNNK+T+AET+EATRQF
Sbjct: 781  LLRWRKRLREGLNGEKKPSPARTSSGAERSRRSGENGGPKLVMFNNKITYAETLEATRQF 840

Query: 12   DEEN 1
            DEEN
Sbjct: 841  DEEN 844


>ref|XP_003631896.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At4g36180-like [Vitis vinifera]
          Length = 1130

 Score =  149 bits (376), Expect = 2e-34
 Identities = 73/124 (58%), Positives = 89/124 (71%)
 Frame = -3

Query: 372  NDPSAFAMNENLCGKPLYKNCENVNKANRRRKMKKLLLMIGVAIAGALLVSLCCCCYIFS 193
            N+PS FAMNENLCGKPL + C+ +N   RR   K+L+L+  VA +GA L++LCCC YIFS
Sbjct: 720  NNPSVFAMNENLCGKPLDRKCKEINTGGRR---KRLILLFAVAASGACLMALCCCFYIFS 776

Query: 192  LLRWRKQLQAAASGEKKRSPARTXXXXXXXXXXXXXXGPKMIMFNNKLTFAETVEATRQF 13
            LLRWRK+L+  A+GEKKRSPAR               GPK++MFNN +T AET EATRQF
Sbjct: 777  LLRWRKRLKEGAAGEKKRSPARASSGASGGRGSTDNGGPKLVMFNNNITLAETSEATRQF 836

Query: 12   DEEN 1
            DEEN
Sbjct: 837  DEEN 840


>ref|XP_002306906.1| predicted protein [Populus trichocarpa] gi|222856355|gb|EEE93902.1|
            predicted protein [Populus trichocarpa]
          Length = 1127

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/124 (58%), Positives = 88/124 (70%)
 Frame = -3

Query: 372  NDPSAFAMNENLCGKPLYKNCENVNKANRRRKMKKLLLMIGVAIAGALLVSLCCCCYIFS 193
            NDPS FAMN  LCGKPL + C NV    R RK KKL+L IGV IA  +L++LCCC YI+S
Sbjct: 718  NDPSVFAMNRELCGKPLDRECANV----RNRKRKKLILFIGVPIAATVLLALCCCAYIYS 773

Query: 192  LLRWRKQLQAAASGEKKRSPARTXXXXXXXXXXXXXXGPKMIMFNNKLTFAETVEATRQF 13
            LLRWRK+L+   +GEKKRSPA                GPK++MFNNK+T+AET+EATRQF
Sbjct: 774  LLRWRKRLRDGVTGEKKRSPASASSGADRSRGSGENGGPKLVMFNNKITYAETLEATRQF 833

Query: 12   DEEN 1
            DE+N
Sbjct: 834  DEDN 837


>ref|XP_003527668.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At4g36180-like [Glycine max]
          Length = 1133

 Score =  145 bits (367), Expect = 3e-33
 Identities = 68/124 (54%), Positives = 89/124 (71%)
 Frame = -3

Query: 372  NDPSAFAMNENLCGKPLYKNCENVNKANRRRKMKKLLLMIGVAIAGALLVSLCCCCYIFS 193
            NDPS FAMN+ LCGKPL++ C N     +RRK ++L++ IGVA+AG  L++LCCC Y++S
Sbjct: 724  NDPSVFAMNQGLCGKPLHRECAN----EKRRKRRRLIIFIGVAVAGLCLLALCCCGYVYS 779

Query: 192  LLRWRKQLQAAASGEKKRSPARTXXXXXXXXXXXXXXGPKMIMFNNKLTFAETVEATRQF 13
            LLRWRK+L+   +GEKKRSP  +              GPK++MFNNK+T AET+EATR F
Sbjct: 780  LLRWRKKLRERVTGEKKRSPTTSSGGERGSRGSGENGGPKLVMFNNKITLAETLEATRNF 839

Query: 12   DEEN 1
            DEEN
Sbjct: 840  DEEN 843


>ref|XP_003523555.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At4g36180-like [Glycine max]
          Length = 1130

 Score =  145 bits (365), Expect = 4e-33
 Identities = 68/124 (54%), Positives = 88/124 (70%)
 Frame = -3

Query: 372  NDPSAFAMNENLCGKPLYKNCENVNKANRRRKMKKLLLMIGVAIAGALLVSLCCCCYIFS 193
            NDPS FAMN+ LCGKPL++ C N      RRK ++L++ IGVA+AG  L++LCCC Y++S
Sbjct: 721  NDPSVFAMNQGLCGKPLHRECAN----EMRRKRRRLIIFIGVAVAGLCLLALCCCGYVYS 776

Query: 192  LLRWRKQLQAAASGEKKRSPARTXXXXXXXXXXXXXXGPKMIMFNNKLTFAETVEATRQF 13
            LLRWRK+L+   +GEKKRSP  +              GPK++MFNNK+T AET+EATR F
Sbjct: 777  LLRWRKKLREGVTGEKKRSPTTSSGGERGSRGSGENGGPKLVMFNNKITLAETLEATRNF 836

Query: 12   DEEN 1
            DEEN
Sbjct: 837  DEEN 840


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