BLASTX nr result

ID: Coptis25_contig00046370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046370
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170765.1| PREDICTED: LOW QUALITY PROTEIN: LRR receptor...    86   4e-15
ref|XP_004143765.1| PREDICTED: LRR receptor-like serine/threonin...    86   4e-15
ref|XP_003548492.1| PREDICTED: LRR receptor-like serine/threonin...    85   5e-15
emb|CBI21262.3| unnamed protein product [Vitis vinifera]               83   3e-14
ref|XP_002276030.1| PREDICTED: LRR receptor-like serine/threonin...    83   3e-14

>ref|XP_004170765.1| PREDICTED: LOW QUALITY PROTEIN: LRR receptor-like
           serine/threonine-protein kinase RPK2-like [Cucumis
           sativus]
          Length = 1041

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 47/101 (46%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
 Frame = -3

Query: 295 QLQVLLVDHNKLFGEXXXXXXXXXXXXXLDVSFNNLSGLIPDFQHWIGCDGFRGNKYLQP 116
           +L++LL+DHN+L GE             LDVSFNNLSG IP   H   C  F GNK+L P
Sbjct: 617 RLEILLLDHNRLTGEIPESFSALSHLTKLDVSFNNLSGHIPHLHHTFDCIYFGGNKFLHP 676

Query: 115 CSDPTSASPSGLPVPL----WHGQRKKMRLVIISMVTSASV 5
           C D  S SP+GLPVPL    W  +RK M +VI    +S  +
Sbjct: 677 CPDSYSDSPAGLPVPLDVEKWKRRRKFMSMVIAVAASSTLI 717


>ref|XP_004143765.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           RPK2-like [Cucumis sativus]
          Length = 1041

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 47/101 (46%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
 Frame = -3

Query: 295 QLQVLLVDHNKLFGEXXXXXXXXXXXXXLDVSFNNLSGLIPDFQHWIGCDGFRGNKYLQP 116
           +L++LL+DHN+L GE             LDVSFNNLSG IP   H   C  F GNK+L P
Sbjct: 617 RLEILLLDHNRLTGEIPESFSALSHLTKLDVSFNNLSGHIPHLHHTFDCIYFGGNKFLHP 676

Query: 115 CSDPTSASPSGLPVPL----WHGQRKKMRLVIISMVTSASV 5
           C D  S SP+GLPVPL    W  +RK M +VI    +S  +
Sbjct: 677 CPDSYSDSPAGLPVPLDVEKWKRRRKFMSMVIAVAASSTLI 717


>ref|XP_003548492.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           RPK2-like, partial [Glycine max]
          Length = 1022

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/99 (48%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
 Frame = -3

Query: 292 LQVLLVDHNKLFGEXXXXXXXXXXXXXLDVSFNNLSGLIPDFQHWIGCDGFRGNKYLQPC 113
           L+ LL+DHN L GE             LDVSFNNLSG IP  QH   CD ++GN +L  C
Sbjct: 596 LETLLLDHNNLSGEIPLTFSTLANLAQLDVSFNNLSGHIPHLQHPSVCDSYKGNAHLHSC 655

Query: 112 SDPTSASPSGLPVPL---WHGQRKKMRLVIISMVTSASV 5
            DP S SP+ LP PL      +R K+R ++I++VTSASV
Sbjct: 656 PDPYSDSPASLPFPLEIQRTHKRWKLRTMVIAVVTSASV 694


>emb|CBI21262.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 45/100 (45%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
 Frame = -3

Query: 292 LQVLLVDHNKLFGEXXXXXXXXXXXXXLDVSFNNLSGLIPDFQHWIGCDGFRGNKYLQPC 113
           L+++L++HN+L GE             LDVSFNNLSG IP  QH   CD F+GN+YL PC
Sbjct: 287 LEIVLLNHNRLVGEIPSSFSTLSSLTELDVSFNNLSGHIPQLQHLSNCDFFKGNQYLHPC 346

Query: 112 SDPTSASPSGLPVPL---WHGQRKKMRLVIISMVTSASVL 2
            DP SA P  LP  L      ++ K++  +I+MV SAS +
Sbjct: 347 LDPYSAPPDRLPDLLEVHKEYRQSKLKSFVIAMVASASFI 386


>ref|XP_002276030.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2
           [Vitis vinifera] gi|147802220|emb|CAN68268.1|
           hypothetical protein VITISV_029909 [Vitis vinifera]
          Length = 1066

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 45/100 (45%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
 Frame = -3

Query: 292 LQVLLVDHNKLFGEXXXXXXXXXXXXXLDVSFNNLSGLIPDFQHWIGCDGFRGNKYLQPC 113
           L+++L++HN+L GE             LDVSFNNLSG IP  QH   CD F+GN+YL PC
Sbjct: 640 LEIVLLNHNRLVGEIPSSFSTLSSLTELDVSFNNLSGHIPQLQHLSNCDFFKGNQYLHPC 699

Query: 112 SDPTSASPSGLPVPL---WHGQRKKMRLVIISMVTSASVL 2
            DP SA P  LP  L      ++ K++  +I+MV SAS +
Sbjct: 700 LDPYSAPPDRLPDLLEVHKEYRQSKLKSFVIAMVASASFI 739


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