BLASTX nr result

ID: Coptis25_contig00046328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046328
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...   182   2e-44
emb|CBI20740.3| unnamed protein product [Vitis vinifera]              182   2e-44
ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis...   164   9e-39
ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a...   160   1e-37
ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a...   153   1e-35

>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score =  182 bits (462), Expect = 2e-44
 Identities = 89/123 (72%), Positives = 104/123 (84%)
 Frame = +1

Query: 1   VCLLVFDECHRATGNHPYTKIMKEFYHKYSNKPKIFGMTASPVIRKGVSSAMDCEDQVST 180
           VCL++ DECHRATGNHPYTKIMKEFYHK  +KPKIFGMTASPVIRKGVSS+MDCE+Q+S 
Sbjct: 169 VCLMIVDECHRATGNHPYTKIMKEFYHKSVDKPKIFGMTASPVIRKGVSSSMDCENQISE 228

Query: 181 LESILDSKIYTIEDRTELESFVPSPVEEKRYYNSILFFHEELKEKLGSSRSKFDDLLVNK 360
           LESILD +IYTIEDRTELE F+PS  E  R+Y++  F + +LK KL SS SKFD+LL+N 
Sbjct: 229 LESILDCQIYTIEDRTELEVFIPSAKEINRFYDASQFHNLDLKAKLKSSWSKFDNLLLNL 288

Query: 361 QSS 369
           Q S
Sbjct: 289 QGS 291


>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score =  182 bits (462), Expect = 2e-44
 Identities = 89/123 (72%), Positives = 104/123 (84%)
 Frame = +1

Query: 1   VCLLVFDECHRATGNHPYTKIMKEFYHKYSNKPKIFGMTASPVIRKGVSSAMDCEDQVST 180
           VCL++ DECHRATGNHPYTKIMKEFYHK  +KPKIFGMTASPVIRKGVSS+MDCE+Q+S 
Sbjct: 177 VCLMIVDECHRATGNHPYTKIMKEFYHKSVDKPKIFGMTASPVIRKGVSSSMDCENQISE 236

Query: 181 LESILDSKIYTIEDRTELESFVPSPVEEKRYYNSILFFHEELKEKLGSSRSKFDDLLVNK 360
           LESILD +IYTIEDRTELE F+PS  E  R+Y++  F + +LK KL SS SKFD+LL+N 
Sbjct: 237 LESILDCQIYTIEDRTELEVFIPSAKEINRFYDASQFHNLDLKAKLKSSWSKFDNLLLNL 296

Query: 361 QSS 369
           Q S
Sbjct: 297 QGS 299


>ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis]
           gi|223544646|gb|EEF46162.1| Ribonuclease III, putative
           [Ricinus communis]
          Length = 1660

 Score =  164 bits (414), Expect = 9e-39
 Identities = 78/124 (62%), Positives = 99/124 (79%)
 Frame = +1

Query: 1   VCLLVFDECHRATGNHPYTKIMKEFYHKYSNKPKIFGMTASPVIRKGVSSAMDCEDQVST 180
           V L++ DECHR TGNHP TKIMKEFYHK SNKPKIFGMTASPV++KGVSSA+DCEDQ+S 
Sbjct: 185 VSLMIIDECHRTTGNHPCTKIMKEFYHKLSNKPKIFGMTASPVVQKGVSSAVDCEDQISE 244

Query: 181 LESILDSKIYTIEDRTELESFVPSPVEEKRYYNSILFFHEELKEKLGSSRSKFDDLLVNK 360
           LE+ILDS+IYTIEDRTE++  VPS  E  ++Y+    +  ++K K+ +S SKFD  L++ 
Sbjct: 245 LETILDSQIYTIEDRTEMDVHVPSAREICKFYDIAQLYSSDIKSKIEASWSKFDASLLSL 304

Query: 361 QSSL 372
           Q S+
Sbjct: 305 QGSI 308


>ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max]
          Length = 1671

 Score =  160 bits (404), Expect = 1e-37
 Identities = 78/123 (63%), Positives = 92/123 (74%)
 Frame = +1

Query: 1   VCLLVFDECHRATGNHPYTKIMKEFYHKYSNKPKIFGMTASPVIRKGVSSAMDCEDQVST 180
           +CL+V DECHR  GNHPYTKIMKEFYH+ + KPKIFGMTASPV +KGVSS MDCEDQ+S 
Sbjct: 189 ICLIVIDECHRTIGNHPYTKIMKEFYHQANEKPKIFGMTASPVGKKGVSSTMDCEDQISE 248

Query: 181 LESILDSKIYTIEDRTELESFVPSPVEEKRYYNSILFFHEELKEKLGSSRSKFDDLLVNK 360
           LESILDS+ YT+EDRTE++  VPS  E  RYY+   F    LK K+ +   KFD LL   
Sbjct: 249 LESILDSQRYTVEDRTEMDRCVPSAKESCRYYDQARFSALSLKPKIEALSFKFDALLSEN 308

Query: 361 QSS 369
           QS+
Sbjct: 309 QSN 311


>ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Cucumis sativus]
          Length = 1359

 Score =  153 bits (387), Expect = 1e-35
 Identities = 74/124 (59%), Positives = 94/124 (75%)
 Frame = +1

Query: 1   VCLLVFDECHRATGNHPYTKIMKEFYHKYSNKPKIFGMTASPVIRKGVSSAMDCEDQVST 180
           +CL++ DECHRATGNHPYTKIMKEFYHK  +KPKIFGMTASPVIRKGVSS++DCE Q++ 
Sbjct: 162 ICLMIIDECHRATGNHPYTKIMKEFYHKSDSKPKIFGMTASPVIRKGVSSSVDCECQIAD 221

Query: 181 LESILDSKIYTIEDRTELESFVPSPVEEKRYYNSILFFHEELKEKLGSSRSKFDDLLVNK 360
           LESILD+++Y IED+ E+E +VPS  E   +Y   +    ELK K+ +   KFD  L N 
Sbjct: 222 LESILDAQVYAIEDKKEVEIYVPSAKEICIFYEPAMPQTMELKAKIEALWFKFDASLSNS 281

Query: 361 QSSL 372
           Q ++
Sbjct: 282 QEAM 285


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