BLASTX nr result

ID: Coptis25_contig00046313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046313
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24883.3| unnamed protein product [Vitis vinifera]              114   6e-24
ref|XP_002275403.1| PREDICTED: uncharacterized protein LOC100261...   114   6e-24
ref|XP_002313304.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_002299943.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
gb|ABK92537.1| unknown [Populus trichocarpa]                          114   6e-24

>emb|CBI24883.3| unnamed protein product [Vitis vinifera]
          Length = 335

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/78 (66%), Positives = 63/78 (80%)
 Frame = +2

Query: 17  FTTTQDPKLYAESHGSSIFTLYVGTKNKAMYGAGRSMQDMLESGEGLPLIVRFRLSTNFK 196
           F T+   +LYA SHGSS F LYVGT+NK MYGAGR+MQDMLE+GEGLPL +R  L ++F+
Sbjct: 235 FATSHGQELYAPSHGSSKFQLYVGTRNKPMYGAGRAMQDMLETGEGLPLAIRVSLKSSFR 294

Query: 197 VVWNLINPKFHHNVECML 250
           VVW+LI PKFHH  EC+L
Sbjct: 295 VVWSLIVPKFHHQAECLL 312


>ref|XP_002275403.1| PREDICTED: uncharacterized protein LOC100261971 [Vitis vinifera]
          Length = 354

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/78 (66%), Positives = 63/78 (80%)
 Frame = +2

Query: 17  FTTTQDPKLYAESHGSSIFTLYVGTKNKAMYGAGRSMQDMLESGEGLPLIVRFRLSTNFK 196
           F T+   +LYA SHGSS F LYVGT+NK MYGAGR+MQDMLE+GEGLPL +R  L ++F+
Sbjct: 254 FATSHGQELYAPSHGSSKFQLYVGTRNKPMYGAGRAMQDMLETGEGLPLAIRVSLKSSFR 313

Query: 197 VVWNLINPKFHHNVECML 250
           VVW+LI PKFHH  EC+L
Sbjct: 314 VVWSLIVPKFHHQAECLL 331


>ref|XP_002313304.1| predicted protein [Populus trichocarpa] gi|222849712|gb|EEE87259.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score =  114 bits (286), Expect = 6e-24
 Identities = 51/84 (60%), Positives = 66/84 (78%)
 Frame = +2

Query: 2   FGPVVFTTTQDPKLYAESHGSSIFTLYVGTKNKAMYGAGRSMQDMLESGEGLPLIVRFRL 181
           FG + F  ++  KLYA+SH S++F L VGT+NK MYGAGR+MQDMLESG GLP++++  L
Sbjct: 57  FGHLRFAMSRGSKLYAQSHTSTLFQLSVGTRNKPMYGAGRNMQDMLESGNGLPIVIQLSL 116

Query: 182 STNFKVVWNLINPKFHHNVECMLV 253
            +NF+VVWNLI PKFHH   C+LV
Sbjct: 117 RSNFRVVWNLIKPKFHHQALCLLV 140


>ref|XP_002299943.1| predicted protein [Populus trichocarpa] gi|222847201|gb|EEE84748.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  114 bits (286), Expect = 6e-24
 Identities = 50/84 (59%), Positives = 65/84 (77%)
 Frame = +2

Query: 2   FGPVVFTTTQDPKLYAESHGSSIFTLYVGTKNKAMYGAGRSMQDMLESGEGLPLIVRFRL 181
           FG + F T++  KLYA+SH S++F L+VGT+NK MYGAG +MQDMLES  GLP+++R  L
Sbjct: 190 FGHLTFATSRGSKLYAQSHSSTLFQLFVGTRNKPMYGAGTNMQDMLESENGLPIVIRVSL 249

Query: 182 STNFKVVWNLINPKFHHNVECMLV 253
            +NF+VVWNLI P FHH   C+LV
Sbjct: 250 RSNFRVVWNLIKPAFHHRAVCLLV 273


>gb|ABK92537.1| unknown [Populus trichocarpa]
          Length = 342

 Score =  114 bits (286), Expect = 6e-24
 Identities = 50/84 (59%), Positives = 65/84 (77%)
 Frame = +2

Query: 2   FGPVVFTTTQDPKLYAESHGSSIFTLYVGTKNKAMYGAGRSMQDMLESGEGLPLIVRFRL 181
           FG + F T++  KLYA+SH S++F L+VGT+NK MYGAG +MQDMLES  GLP+++R  L
Sbjct: 238 FGHLTFATSRGSKLYAQSHSSTLFQLFVGTRNKPMYGAGTNMQDMLESENGLPIVIRVSL 297

Query: 182 STNFKVVWNLINPKFHHNVECMLV 253
            +NF+VVWNLI P FHH   C+LV
Sbjct: 298 RSNFRVVWNLIKPAFHHRAVCLLV 321


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