BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046296
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    97   1e-18
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...    91   1e-16
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...    91   1e-16
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...    91   1e-16
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    89   4e-16

>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 44/85 (51%), Positives = 63/85 (74%)
 Frame = +1

Query: 10   LIHQCLSTLSFQILLNGYPLNKFTPERGLRQGDPLSLYLFIIVSSKALSRMIAKAEMEEK 189
            LI  C+ ++++ +LL G P  K  P RGLRQGDP+S YLF+IV ++ LS +I KAE E++
Sbjct: 893  LIMDCVKSVTYSVLLQGAPFGKIKPSRGLRQGDPISPYLFLIV-AEGLSALIRKAEREQQ 951

Query: 190  VHGIKIRRAAPSITHILYADDLILF 264
            +HG+ I R APS++H+ YADD +LF
Sbjct: 952  IHGVAIARGAPSVSHLFYADDSLLF 976


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/87 (47%), Positives = 66/87 (75%)
 Frame = +1

Query: 1    WRTLIHQCLSTLSFQILLNGYPLNKFTPERGLRQGDPLSLYLFIIVSSKALSRMIAKAEM 180
            W  LI +C+ST++++I +NG     F+PERGLRQGDPLS YLF++  ++  S +++K E 
Sbjct: 803  WVNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYLFLL-CAEGFSALLSKTEE 861

Query: 181  EEKVHGIKIRRAAPSITHILYADDLIL 261
            E ++HGI+I + APS++H+L+ADD ++
Sbjct: 862  EGRLHGIRICQGAPSVSHLLFADDSLI 888


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/87 (47%), Positives = 66/87 (75%)
 Frame = +1

Query: 1    WRTLIHQCLSTLSFQILLNGYPLNKFTPERGLRQGDPLSLYLFIIVSSKALSRMIAKAEM 180
            W  LI +C+ST++++I +NG     F+PERGLRQGDPLS YLF++  ++  S +++K E 
Sbjct: 831  WVNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYLFLL-CAEGFSALLSKTEE 889

Query: 181  EEKVHGIKIRRAAPSITHILYADDLIL 261
            E ++HGI+I + APS++H+L+ADD ++
Sbjct: 890  EGRLHGIRICQGAPSVSHLLFADDSLI 916


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/87 (47%), Positives = 66/87 (75%)
 Frame = +1

Query: 1    WRTLIHQCLSTLSFQILLNGYPLNKFTPERGLRQGDPLSLYLFIIVSSKALSRMIAKAEM 180
            W  LI +C+ST++++I +NG     F+PERGLRQGDPLS YLF++  ++  S +++K E 
Sbjct: 799  WVNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYLFLL-CAEGFSALLSKTEE 857

Query: 181  EEKVHGIKIRRAAPSITHILYADDLIL 261
            E ++HGI+I + APS++H+L+ADD ++
Sbjct: 858  EGRLHGIRICQGAPSVSHLLFADDSLI 884


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 40/89 (44%), Positives = 61/89 (68%)
 Frame = +1

Query: 1   WRTLIHQCLSTLSFQILLNGYPLNKFTPERGLRQGDPLSLYLFIIVSSKALSRMIAKAEM 180
           W  L+  C++T+S+  ++NG      TP RGLRQGDPLS +LFI+V+  A S+M+ +  +
Sbjct: 609 WVNLVMSCVATVSYSFIINGRVCGSVTPSRGLRQGDPLSPFLFILVAD-AFSQMVKQKVV 667

Query: 181 EEKVHGIKIRRAAPSITHILYADDLILFT 267
            +++HG K  R  P I+H+L+ADD +LFT
Sbjct: 668 SKEIHGAKASRNGPEISHLLFADDSLLFT 696