BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046278
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]      96   4e-18
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    95   5e-18
dbj|BAF01759.1| putative non-LTR retroelement reverse transcript...    87   1e-15
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    87   1e-15
gb|EEE69250.1| hypothetical protein OsJ_28502 [Oryza sativa Japo...    85   5e-15

>gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]
          Length = 381

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 41/85 (48%), Positives = 62/85 (72%)
 Frame = -3

Query: 255 KSPGPDGYQAKFFLTYWDILGPRVCSMVQYFFAHGTFSKVLNHLFITLVPKVSNPLKPEN 76
           ++PGPDG  A F+ TYWDI+GP V   V++FF  G F   LNH  + L+PK++NP+  ++
Sbjct: 246 RAPGPDGLTASFYQTYWDIVGPAVVEEVRHFFNTGEFYSDLNHTNLCLIPKITNPITMKD 305

Query: 75  FRPISLANVLYKLV*KIITSRMRSL 1
           FRPI+L NV+YK++ KI++  M+S+
Sbjct: 306 FRPIALCNVMYKIISKILSLCMKSI 330


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 42/85 (49%), Positives = 57/85 (67%)
 Frame = -3

Query: 261 PLKSPGPDGYQAKFFLTYWDILGPRVCSMVQYFFAHGTFSKVLNHLFITLVPKVSNPLKP 82
           P KSPGPDG+   FF  YW ++G  VC  VQ FF  G   K +NH F+ L+PKV  P+  
Sbjct: 458 PDKSPGPDGFPPYFFQKYWTLIGKSVCRAVQAFFHSGYMLKEVNHTFLALIPKVDKPVNA 517

Query: 81  ENFRPISLANVLYKLV*KIITSRMR 7
            +FRPISL + +YK++ KIIT+R++
Sbjct: 518 NHFRPISLCSTIYKVISKIITNRLK 542


>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 400

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/87 (47%), Positives = 56/87 (64%)
 Frame = -3

Query: 261 PLKSPGPDGYQAKFFLTYWDILGPRVCSMVQYFFAHGTFSKVLNHLFITLVPKVSNPLKP 82
           P K+PGPDG  A F+  YWD+ GP +  +VQ F + G F + LN   I L+PK   P K 
Sbjct: 23  PDKAPGPDGMTAFFYQHYWDLTGPDLIKLVQNFHSTGFFDERLNETNICLIPKTERPRKM 82

Query: 81  ENFRPISLANVLYKLV*KIITSRMRSL 1
             FRPISL NV YK++ K+++SR++ L
Sbjct: 83  AEFRPISLCNVSYKVISKVLSSRLKRL 109


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/87 (47%), Positives = 56/87 (64%)
 Frame = -3

Query: 261 PLKSPGPDGYQAKFFLTYWDILGPRVCSMVQYFFAHGTFSKVLNHLFITLVPKVSNPLKP 82
           P K+PGPDG  A F+  YWD+ GP +  +VQ F + G F + LN   I L+PK   P K 
Sbjct: 389 PDKAPGPDGMTAFFYQHYWDLTGPDLIKLVQNFHSTGFFDERLNETNICLIPKTERPRKM 448

Query: 81  ENFRPISLANVLYKLV*KIITSRMRSL 1
             FRPISL NV YK++ K+++SR++ L
Sbjct: 449 AEFRPISLCNVSYKVISKVLSSRLKRL 475


>gb|EEE69250.1| hypothetical protein OsJ_28502 [Oryza sativa Japonica Group]
          Length = 673

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 36/87 (41%), Positives = 61/87 (70%)
 Frame = -3

Query: 261 PLKSPGPDGYQAKFFLTYWDILGPRVCSMVQYFFAHGTFSKVLNHLFITLVPKVSNPLKP 82
           PLK+PGPDG+ A+FF   W +L   + + V+ FF++G     +N+ +I L+PK++ P++ 
Sbjct: 571 PLKAPGPDGFLARFFQRTWGVLKEEIAAGVRTFFSYGLLPGGVNNTYIVLIPKINQPVEL 630

Query: 81  ENFRPISLANVLYKLV*KIITSRMRSL 1
           +NF PISL +V+YK+V K + +R+R +
Sbjct: 631 KNFSPISLCSVIYKVVSKCLVNRLRPI 657