BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046263
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543556.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...   142   3e-32
ref|XP_003543555.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...   142   3e-32
ref|XP_002513444.1| Type II DNA topoisomerase VI subunit B, puta...   141   5e-32
ref|XP_004142138.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...   140   1e-31
ref|XP_003597480.1| DNA topoisomerase 6 subunit B [Medicago trun...   137   1e-30

>ref|XP_003543556.1| PREDICTED: DNA topoisomerase 6 subunit B-like isoform 2 [Glycine
           max]
          Length = 656

 Score =  142 bits (358), Expect = 3e-32
 Identities = 70/83 (84%), Positives = 76/83 (91%)
 Frame = +2

Query: 2   MDTAGSSESPIEPKKRNSKTPKKAKESVLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE 181
           MD  GSSESPIE KK  SKTP+K KE++LKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE
Sbjct: 1   MDGDGSSESPIETKKAKSKTPRKPKETILKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE 60

Query: 182 LVENCLDSAESISELPIIEVTIE 250
           LVEN LDSAESISELP++E+TIE
Sbjct: 61  LVENSLDSAESISELPVVEITIE 83


>ref|XP_003543555.1| PREDICTED: DNA topoisomerase 6 subunit B-like isoform 1 [Glycine
           max]
          Length = 673

 Score =  142 bits (358), Expect = 3e-32
 Identities = 70/83 (84%), Positives = 76/83 (91%)
 Frame = +2

Query: 2   MDTAGSSESPIEPKKRNSKTPKKAKESVLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE 181
           MD  GSSESPIE KK  SKTP+K KE++LKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE
Sbjct: 1   MDGDGSSESPIETKKAKSKTPRKPKETILKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE 60

Query: 182 LVENCLDSAESISELPIIEVTIE 250
           LVEN LDSAESISELP++E+TIE
Sbjct: 61  LVENSLDSAESISELPVVEITIE 83


>ref|XP_002513444.1| Type II DNA topoisomerase VI subunit B, putative [Ricinus communis]
           gi|223547352|gb|EEF48847.1| Type II DNA topoisomerase VI
           subunit B, putative [Ricinus communis]
          Length = 656

 Score =  141 bits (356), Expect = 5e-32
 Identities = 70/83 (84%), Positives = 74/83 (89%)
 Frame = +2

Query: 2   MDTAGSSESPIEPKKRNSKTPKKAKESVLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE 181
           M+T GSSESP EPKK  SKTP+K KES LKQKSPAEFFAENKNIAGFDNPGK LYTTVRE
Sbjct: 1   METGGSSESPNEPKKSKSKTPRKPKESTLKQKSPAEFFAENKNIAGFDNPGKCLYTTVRE 60

Query: 182 LVENCLDSAESISELPIIEVTIE 250
           LVEN LDSAESISELP +E+TIE
Sbjct: 61  LVENSLDSAESISELPFVEITIE 83


>ref|XP_004142138.1| PREDICTED: DNA topoisomerase 6 subunit B-like [Cucumis sativus]
           gi|449525918|ref|XP_004169963.1| PREDICTED: DNA
           topoisomerase 6 subunit B-like [Cucumis sativus]
          Length = 696

 Score =  140 bits (352), Expect = 1e-31
 Identities = 68/83 (81%), Positives = 74/83 (89%)
 Frame = +2

Query: 2   MDTAGSSESPIEPKKRNSKTPKKAKESVLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE 181
           M+  G SESP EPKK  SKTP+K KES+LKQKSPAEFFAENKNIAGFDNPGK LYTTVRE
Sbjct: 1   MEAGGGSESPDEPKKGKSKTPRKPKESILKQKSPAEFFAENKNIAGFDNPGKCLYTTVRE 60

Query: 182 LVENCLDSAESISELPIIEVTIE 250
           LVEN LDSAESISELP++E+TIE
Sbjct: 61  LVENSLDSAESISELPVVEITIE 83


>ref|XP_003597480.1| DNA topoisomerase 6 subunit B [Medicago truncatula]
           gi|355486528|gb|AES67731.1| DNA topoisomerase 6 subunit
           B [Medicago truncatula]
          Length = 671

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/78 (85%), Positives = 73/78 (93%)
 Frame = +2

Query: 17  SSESPIEPKKRNSKTPKKAKESVLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENC 196
           +SESPIE KK  SKTP+K KE+VLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVEN 
Sbjct: 4   NSESPIESKKSKSKTPRKPKETVLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENA 63

Query: 197 LDSAESISELPIIEVTIE 250
           LDSAESISELP++E+TIE
Sbjct: 64  LDSAESISELPVVEITIE 81