BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046246
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002871294.1| mitochondrial transcription termination fact...    69   3e-10
ref|NP_568185.1| Mitochondrial transcription termination factor ...    69   3e-10
ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_002520663.1| conserved hypothetical protein [Ricinus comm...    67   1e-09
ref|XP_002271867.1| PREDICTED: uncharacterized protein LOC100263...    67   2e-09

>ref|XP_002871294.1| mitochondrial transcription termination factor family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297317131|gb|EFH47553.1| mitochondrial transcription
           termination factor family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 404

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/64 (53%), Positives = 45/64 (70%)
 Frame = +2

Query: 2   FSMQKRIMPRCSVIRVIMSNSLIDKDRHLDALLKMGEKNFLEKFVTKYEAEFPEVLKAYK 181
           FS++KRI+PRCSV +V++SN L+ +D  L +LL   EK FLEK V KYE E PE++  Y 
Sbjct: 340 FSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMDVYL 399

Query: 182 GMGK 193
           G  K
Sbjct: 400 GCTK 403


>ref|NP_568185.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana]
           gi|13878065|gb|AAK44110.1|AF370295_1 unknown protein
           [Arabidopsis thaliana] gi|6562304|emb|CAB62602.1|
           putative protein [Arabidopsis thaliana]
           gi|10176724|dbj|BAB09954.1| unnamed protein product
           [Arabidopsis thaliana] gi|17104655|gb|AAL34216.1|
           unknown protein [Arabidopsis thaliana]
           gi|21592327|gb|AAM64278.1| unknown [Arabidopsis
           thaliana] gi|332003836|gb|AED91219.1| Mitochondrial
           transcription termination factor family protein
           [Arabidopsis thaliana]
          Length = 405

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/64 (53%), Positives = 45/64 (70%)
 Frame = +2

Query: 2   FSMQKRIMPRCSVIRVIMSNSLIDKDRHLDALLKMGEKNFLEKFVTKYEAEFPEVLKAYK 181
           FS++KRI+PRCSV +V++SN L+ +D  L +LL   EK FLEK V KYE E PE++  Y 
Sbjct: 341 FSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMNLYL 400

Query: 182 GMGK 193
           G  K
Sbjct: 401 GCTK 404


>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/60 (53%), Positives = 44/60 (73%)
 Frame = +2

Query: 5   SMQKRIMPRCSVIRVIMSNSLIDKDRHLDALLKMGEKNFLEKFVTKYEAEFPEVLKAYKG 184
           S++KRI+PRC VI+V+ S  LI KD  L+ +L   EK FLE+FVTK+E E P++L  Y+G
Sbjct: 334 SLEKRIIPRCKVIQVLWSKGLIKKDISLNTVLLPVEKRFLERFVTKFEEEVPQLLSVYEG 393


>ref|XP_002520663.1| conserved hypothetical protein [Ricinus communis]
           gi|223540048|gb|EEF41625.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 377

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/61 (52%), Positives = 44/61 (72%)
 Frame = +2

Query: 2   FSMQKRIMPRCSVIRVIMSNSLIDKDRHLDALLKMGEKNFLEKFVTKYEAEFPEVLKAYK 181
           FS++KRI+PRC VIRV+M+  L+ KD  L  +L   EK FL++FV KYE E P +L+ Y+
Sbjct: 309 FSLEKRIVPRCRVIRVLMNKGLVKKDVSLATVLVPTEKCFLDRFVIKYEEEVPLLLRVYE 368

Query: 182 G 184
           G
Sbjct: 369 G 369


>ref|XP_002271867.1| PREDICTED: uncharacterized protein LOC100263451 [Vitis vinifera]
          Length = 412

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/61 (47%), Positives = 43/61 (70%)
 Frame = +2

Query: 2   FSMQKRIMPRCSVIRVIMSNSLIDKDRHLDALLKMGEKNFLEKFVTKYEAEFPEVLKAYK 181
           +S++KRI+PRCSV RV++   L+ KD  L A L+  EK FL++FV KY+   P++L  +K
Sbjct: 332 YSLEKRIIPRCSVARVLILKGLVKKDMGLGAFLRFTEKKFLDRFVIKYQNHIPQLLNLFK 391

Query: 182 G 184
           G
Sbjct: 392 G 392