BLASTX nr result

ID: Coptis25_contig00046244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046244
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528499.1| PREDICTED: uncharacterized protein LOC100796...   142   4e-32
ref|XP_003520171.1| PREDICTED: uncharacterized protein LOC100808...   141   6e-32
ref|XP_002521842.1| lupus la ribonucleoprotein, putative [Ricinu...   138   5e-31
ref|XP_002281817.1| PREDICTED: uncharacterized protein LOC100241...   137   9e-31
emb|CAN81423.1| hypothetical protein VITISV_035943 [Vitis vinifera]   136   2e-30

>ref|XP_003528499.1| PREDICTED: uncharacterized protein LOC100796786 [Glycine max]
          Length = 399

 Score =  142 bits (357), Expect = 4e-32
 Identities = 67/94 (71%), Positives = 76/94 (80%)
 Frame = -1

Query: 284 QSRVVVAENLPEDYSHRNLEKIFGVVGSVKTVRICHPQESNASRSKGDVVISNKLHALIE 105
           QSR VVAENLP+D+SH+NL+KIFG+VGSVKT+RICHPQE N+SR K D  +SNKLHAL+E
Sbjct: 185 QSRTVVAENLPDDHSHQNLQKIFGMVGSVKTIRICHPQEPNSSRPKSDFFVSNKLHALVE 244

Query: 104 YETGDQAEKAVEKLNDERNWRKGXXXXXXXXRSP 3
           YET D AEKA EKLNDERNWRKG         SP
Sbjct: 245 YETSDIAEKAAEKLNDERNWRKGMRVRMFVRCSP 278


>ref|XP_003520171.1| PREDICTED: uncharacterized protein LOC100808205 [Glycine max]
          Length = 404

 Score =  141 bits (355), Expect = 6e-32
 Identities = 65/93 (69%), Positives = 76/93 (81%)
 Frame = -1

Query: 281 SRVVVAENLPEDYSHRNLEKIFGVVGSVKTVRICHPQESNASRSKGDVVISNKLHALIEY 102
           +R VVAENLP+D+SH+NL+KIFG+VGSVKT+RICHPQE N+SR K D ++SNKLHAL+EY
Sbjct: 188 ARTVVAENLPDDHSHQNLQKIFGIVGSVKTIRICHPQEPNSSRPKSDFIVSNKLHALVEY 247

Query: 101 ETGDQAEKAVEKLNDERNWRKGXXXXXXXXRSP 3
           ET D AEKA EKLNDERNWRKG         SP
Sbjct: 248 ETSDIAEKAAEKLNDERNWRKGMRVRLFLRCSP 280


>ref|XP_002521842.1| lupus la ribonucleoprotein, putative [Ricinus communis]
           gi|223538880|gb|EEF40478.1| lupus la ribonucleoprotein,
           putative [Ricinus communis]
          Length = 440

 Score =  138 bits (347), Expect = 5e-31
 Identities = 66/94 (70%), Positives = 75/94 (79%)
 Frame = -1

Query: 284 QSRVVVAENLPEDYSHRNLEKIFGVVGSVKTVRICHPQESNASRSKGDVVISNKLHALIE 105
           QSR VV ENLPED+SH+NLEKIF VVGSVKT+RICHPQESN+SR+K D  +SNKLHAL+E
Sbjct: 222 QSRTVVVENLPEDHSHQNLEKIFSVVGSVKTIRICHPQESNSSRTKSDFFMSNKLHALVE 281

Query: 104 YETGDQAEKAVEKLNDERNWRKGXXXXXXXXRSP 3
           +E  + AEKAVE LNDERNWRKG         SP
Sbjct: 282 FEGSEAAEKAVENLNDERNWRKGLRVRVLLRCSP 315


>ref|XP_002281817.1| PREDICTED: uncharacterized protein LOC100241743 [Vitis vinifera]
           gi|297741333|emb|CBI32464.3| unnamed protein product
           [Vitis vinifera]
          Length = 412

 Score =  137 bits (345), Expect = 9e-31
 Identities = 68/94 (72%), Positives = 76/94 (80%)
 Frame = -1

Query: 284 QSRVVVAENLPEDYSHRNLEKIFGVVGSVKTVRICHPQESNASRSKGDVVISNKLHALIE 105
           Q+  VVAENLPED+SH+NL+KIF VVGSVK +RICHPQESN SRSKGD  ISNKLHAL+E
Sbjct: 194 QAHTVVAENLPEDHSHQNLQKIFSVVGSVKNIRICHPQESNNSRSKGDFFISNKLHALVE 253

Query: 104 YETGDQAEKAVEKLNDERNWRKGXXXXXXXXRSP 3
           YE+ + AEKAVE LNDERNWRKG        RSP
Sbjct: 254 YESVEIAEKAVEMLNDERNWRKGLRVRMLLRRSP 287


>emb|CAN81423.1| hypothetical protein VITISV_035943 [Vitis vinifera]
          Length = 941

 Score =  136 bits (342), Expect = 2e-30
 Identities = 67/94 (71%), Positives = 76/94 (80%)
 Frame = -1

Query: 284 QSRVVVAENLPEDYSHRNLEKIFGVVGSVKTVRICHPQESNASRSKGDVVISNKLHALIE 105
           Q+  VVAENLP+D+SH+NL+KIF VVGSVK +RICHPQESN SRSKGD  ISNKLHAL+E
Sbjct: 178 QAHTVVAENLPDDHSHQNLQKIFSVVGSVKNIRICHPQESNNSRSKGDFFISNKLHALVE 237

Query: 104 YETGDQAEKAVEKLNDERNWRKGXXXXXXXXRSP 3
           YE+ + AEKAVE LNDERNWRKG        RSP
Sbjct: 238 YESVEIAEKAVEMLNDERNWRKGLRVRMLLRRSP 271


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