BLASTX nr result

ID: Coptis25_contig00046218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046218
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264003.1| PREDICTED: uncharacterized protein LOC100266...   127   1e-27
emb|CAN61512.1| hypothetical protein VITISV_013332 [Vitis vinifera]   127   1e-27
ref|XP_004166221.1| PREDICTED: uncharacterized protein LOC101228...   114   1e-23
ref|XP_004148816.1| PREDICTED: uncharacterized protein LOC101204...   114   1e-23
ref|XP_002300938.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22

>ref|XP_002264003.1| PREDICTED: uncharacterized protein LOC100266148 [Vitis vinifera]
           gi|302142766|emb|CBI19969.3| unnamed protein product
           [Vitis vinifera]
          Length = 315

 Score =  127 bits (318), Expect = 1e-27
 Identities = 64/76 (84%), Positives = 69/76 (90%)
 Frame = -2

Query: 230 GDMKIYAFKTLKNSTIQVRIEKLSNKSGSPSMVDIKEFSCAYRAQLDEAEQVGTIPENLS 51
           GD+KIYAFKTL NSTIQVRIEKLSNKSGSPSM DI+ FS  YRA+LDEAE  G++PENLS
Sbjct: 152 GDLKIYAFKTLANSTIQVRIEKLSNKSGSPSMTDIEAFSSIYRAKLDEAEIAGSVPENLS 211

Query: 50  LEVSSPGVERVVQIPQ 3
           LEVSSPGVERVVQIPQ
Sbjct: 212 LEVSSPGVERVVQIPQ 227


>emb|CAN61512.1| hypothetical protein VITISV_013332 [Vitis vinifera]
          Length = 231

 Score =  127 bits (318), Expect = 1e-27
 Identities = 64/76 (84%), Positives = 69/76 (90%)
 Frame = -2

Query: 230 GDMKIYAFKTLKNSTIQVRIEKLSNKSGSPSMVDIKEFSCAYRAQLDEAEQVGTIPENLS 51
           GD+KIYAFKTL NSTIQVRIEKLSNKSGSPSM DI+ FS  YRA+LDEAE  G++PENLS
Sbjct: 68  GDLKIYAFKTLANSTIQVRIEKLSNKSGSPSMTDIEAFSSIYRAKLDEAEIAGSVPENLS 127

Query: 50  LEVSSPGVERVVQIPQ 3
           LEVSSPGVERVVQIPQ
Sbjct: 128 LEVSSPGVERVVQIPQ 143


>ref|XP_004166221.1| PREDICTED: uncharacterized protein LOC101228874 [Cucumis sativus]
          Length = 383

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/75 (73%), Positives = 66/75 (88%)
 Frame = -2

Query: 230 GDMKIYAFKTLKNSTIQVRIEKLSNKSGSPSMVDIKEFSCAYRAQLDEAEQVGTIPENLS 51
           GD+KIYAFKT+ NST+QVRIEKLS KSGSP+M DI+ FS  YRA+LD+AE   ++PEN+S
Sbjct: 220 GDLKIYAFKTVSNSTVQVRIEKLSTKSGSPNMEDIEAFSTTYRARLDDAELAKSVPENIS 279

Query: 50  LEVSSPGVERVVQIP 6
           LEVSSPGVERVV+IP
Sbjct: 280 LEVSSPGVERVVRIP 294


>ref|XP_004148816.1| PREDICTED: uncharacterized protein LOC101204078 [Cucumis sativus]
          Length = 312

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/75 (73%), Positives = 66/75 (88%)
 Frame = -2

Query: 230 GDMKIYAFKTLKNSTIQVRIEKLSNKSGSPSMVDIKEFSCAYRAQLDEAEQVGTIPENLS 51
           GD+KIYAFKT+ NST+QVRIEKLS KSGSP+M DI+ FS  YRA+LD+AE   ++PEN+S
Sbjct: 149 GDLKIYAFKTVSNSTVQVRIEKLSTKSGSPNMEDIEAFSTTYRARLDDAELAKSVPENIS 208

Query: 50  LEVSSPGVERVVQIP 6
           LEVSSPGVERVV+IP
Sbjct: 209 LEVSSPGVERVVRIP 223


>ref|XP_002300938.1| predicted protein [Populus trichocarpa] gi|222842664|gb|EEE80211.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  109 bits (273), Expect = 2e-22
 Identities = 54/75 (72%), Positives = 66/75 (88%)
 Frame = -2

Query: 227 DMKIYAFKTLKNSTIQVRIEKLSNKSGSPSMVDIKEFSCAYRAQLDEAEQVGTIPENLSL 48
           +++IYAFKTL NSTIQVRIE+L+NKSGSP+M DI+ FS  YRA+LDEAE   TI EN++L
Sbjct: 151 ELEIYAFKTLSNSTIQVRIERLTNKSGSPNMEDIEAFSTTYRARLDEAELAKTITENITL 210

Query: 47  EVSSPGVERVVQIPQ 3
           EVSSPGVERVV+IP+
Sbjct: 211 EVSSPGVERVVRIPE 225


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