BLASTX nr result

ID: Coptis25_contig00046213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046213
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB02959.1| unnamed protein product [Arabidopsis thaliana]         91   1e-16
ref|NP_001030726.2| AP2/B3 domain-containing transcription facto...    89   4e-16
ref|XP_002282080.2| PREDICTED: B3 domain-containing protein At3g...    89   5e-16
emb|CAN67499.1| hypothetical protein VITISV_019679 [Vitis vinifera]    89   5e-16
ref|XP_003597798.1| B3 domain-containing protein [Medicago trunc...    87   2e-15

>dbj|BAB02959.1| unnamed protein product [Arabidopsis thaliana]
          Length = 318

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 50/130 (38%), Positives = 73/130 (56%)
 Frame = -1

Query: 414 KEHLPSQDLMMELVDEQGVKSEAKYLSNKGGLSGGWRWFSLSHRLLDGDAVVFMLVEKAK 235
           K H+P +D++M LVDE+  +S+AKYL+ K GLSGGWR F++ H+L+DGDAVVF L+ +  
Sbjct: 163 KAHMPKRDVIMTLVDEEEEESQAKYLAQKNGLSGGWRGFAIDHQLVDGDAVVFHLIARTT 222

Query: 234 FQVHIFRVRPSFARDWVISDKKSSVKSFGGFESNDKLGDYDEVGASNEAAEIVMTCKRIK 55
           F+V+I RV      D       S        +S+    D D    SNE  +  ++  R  
Sbjct: 223 FKVYIIRVNDDANND-------SDGNEVNDDDSDGNEEDRDNDNESNEKQKETVSEGRQL 275

Query: 54  RKASTEKKEV 25
           R +   K+ V
Sbjct: 276 RSSGKRKRRV 285


>ref|NP_001030726.2| AP2/B3 domain-containing transcription factor [Arabidopsis
           thaliana] gi|122178676|sp|Q1G3M3.1|Y3918_ARATH RecName:
           Full=B3 domain-containing protein At3g19184
           gi|98961801|gb|ABF59230.1| unknown protein [Arabidopsis
           thaliana] gi|225898657|dbj|BAH30459.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332642684|gb|AEE76205.1| AP2/B3 domain-containing
           transcription factor [Arabidopsis thaliana]
          Length = 277

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 49/128 (38%), Positives = 72/128 (56%)
 Frame = -1

Query: 414 KEHLPSQDLMMELVDEQGVKSEAKYLSNKGGLSGGWRWFSLSHRLLDGDAVVFMLVEKAK 235
           K H+P +D++M LVDE+  +S+AKYL+ K GLSGGWR F++ H+L+DGDAVVF L+ +  
Sbjct: 153 KAHMPKRDVIMTLVDEEEEESQAKYLAQKNGLSGGWRGFAIDHQLVDGDAVVFHLIARTT 212

Query: 234 FQVHIFRVRPSFARDWVISDKKSSVKSFGGFESNDKLGDYDEVGASNEAAEIVMTCKRIK 55
           F+V+I RV      D       S        +S+    D D    SNE  +  ++  R  
Sbjct: 213 FKVYIIRVNDDANND-------SDGNEVNDDDSDGNEEDRDNDNESNEKQKETVSEGRQL 265

Query: 54  RKASTEKK 31
           R +   K+
Sbjct: 266 RSSGKRKR 273


>ref|XP_002282080.2| PREDICTED: B3 domain-containing protein At3g19184-like [Vitis
           vinifera]
          Length = 249

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 48/120 (40%), Positives = 69/120 (57%)
 Frame = -1

Query: 414 KEHLPSQDLMMELVDEQGVKSEAKYLSNKGGLSGGWRWFSLSHRLLDGDAVVFMLVEKAK 235
           K HLP  D M+ LVDE G +S  KYL+ K GLSGGWR F++ H L+DGDA+VF L++  K
Sbjct: 150 KMHLPKHDEMISLVDEDGNESPVKYLAEKTGLSGGWRGFAIDHELVDGDALVFQLIKPTK 209

Query: 234 FQVHIFRVRPSFARDWVISDKKSSVKSFGGFESNDKLGDYDEVGASNEAAEIVMTCKRIK 55
           FQV+I  ++P  ++D                      GD D+    ++A+ + M+ KRI+
Sbjct: 210 FQVYI--IKPDQSKD----------------------GDKDDGDEDSDASPLDMSAKRIR 245


>emb|CAN67499.1| hypothetical protein VITISV_019679 [Vitis vinifera]
          Length = 930

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 48/120 (40%), Positives = 69/120 (57%)
 Frame = -1

Query: 414  KEHLPSQDLMMELVDEQGVKSEAKYLSNKGGLSGGWRWFSLSHRLLDGDAVVFMLVEKAK 235
            K HLP  D M+ LVDE G +S  KYL+ K GLSGGWR F++ H L+DGDA+VF L++  K
Sbjct: 791  KMHLPKHDEMISLVDEDGNESPVKYLAEKTGLSGGWRGFAIDHELVDGDALVFQLIKPTK 850

Query: 234  FQVHIFRVRPSFARDWVISDKKSSVKSFGGFESNDKLGDYDEVGASNEAAEIVMTCKRIK 55
            FQV+I  ++P  ++D                      GD D+    ++A+ + M+ KRI+
Sbjct: 851  FQVYI--IKPDQSKD----------------------GDKDDGDEDSDASPLDMSAKRIR 886



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 43/127 (33%), Positives = 64/127 (50%)
 Frame = -1

Query: 414 KEHLPSQDLMMELVDEQGVKSEAKYLSNKGGLSGGWRWFSLSHRLLDGDAVVFMLVEKAK 235
           K HLP  D  + L DE G + E  +L N+ GLS GWR FSL H+L  GD +VF+LV   K
Sbjct: 63  KLHLPENDATIILEDEAGEEYETNFLVNRSGLSAGWRKFSLDHQLKVGDILVFLLVGPCK 122

Query: 234 FQVHIFRVRPSFARDWVISDKKSSVKSFGGFESNDKLGDYDEVGASNEAAEIVMTCKRIK 55
           F+V I RV  +     +  D    +         + L + ++V   +E  ++      +K
Sbjct: 123 FKVFIVRVEYT-----IEDDVAGCLLDLRDSRRKNPLVEEEKVKVKDEVQQLKQRTSEMK 177

Query: 54  RKASTEK 34
           RK S ++
Sbjct: 178 RKPSAKR 184



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/54 (51%), Positives = 39/54 (72%)
 Frame = -1

Query: 408 HLPSQDLMMELVDEQGVKSEAKYLSNKGGLSGGWRWFSLSHRLLDGDAVVFMLV 247
           H+P  D  + LVD++G + + K+L  K GLSGGWR FS++H LL+GD +VF LV
Sbjct: 276 HMPKYDTTIILVDKRGAEYKTKFLVGKTGLSGGWRGFSIAHNLLEGDVLVFGLV 329


>ref|XP_003597798.1| B3 domain-containing protein [Medicago truncatula]
           gi|355486846|gb|AES68049.1| B3 domain-containing protein
           [Medicago truncatula]
          Length = 727

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 54/137 (39%), Positives = 74/137 (54%)
 Frame = -1

Query: 411 EHLPSQDLMMELVDEQGVKSEAKYLSNKGGLSGGWRWFSLSHRLLDGDAVVFMLVEKAKF 232
           EHLP  D  M L DE+G++ +A YL+ K GLSGGWR F+L H+L DGDAVVF LVE A+F
Sbjct: 483 EHLPKTDYTMVLEDEKGLEYDAVYLARKTGLSGGWRGFALEHKLDDGDAVVFELVEAARF 542

Query: 231 QVHIFRVRPSFARDWVISDKKSSVKSFGGFESNDKLGDYDEVGASNEAAEIVMTCKRIKR 52
           +V+I R                       FE+ D+  + +E  A  E    + T K IK+
Sbjct: 543 KVYIVR----------------------AFENIDEEEEKEESDALVEDGN-MCTSKTIKK 579

Query: 51  KASTEKKEVAAASRKQE 1
             + + KE    +R Q+
Sbjct: 580 SETVKPKEATKKTRMQK 596


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