BLASTX nr result

ID: Coptis25_contig00046201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046201
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]    77   1e-12
emb|CBI19029.3| unnamed protein product [Vitis vinifera]               76   3e-12
ref|XP_003601043.1| ATPase family AAA domain-containing protein ...    57   1e-06
ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784...    55   6e-06

>emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]
          Length = 1170

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/87 (48%), Positives = 59/87 (67%)
 Frame = -3

Query: 288 NMEAKKEAMLNRNFSIQDGDEFSAQCDGLNDFSNSSGSPVAFIRRTARRGICTVFSSHSE 109
           ++EAKKEAM +RN S+ DG+ F+A+ D   + SNSSGSP  F RR  RR + T+ SS+SE
Sbjct: 654 SIEAKKEAMFSRNCSVLDGNGFAAEFDIGCELSNSSGSPATFTRRNVRRKLDTILSSNSE 713

Query: 108 DEIFTDNIPKDINALSLDLCNGGFPGV 28
           DE+F+D+ P     +S +L +G   GV
Sbjct: 714 DEVFSDSFP----VVSHNLLDGTDSGV 736


>emb|CBI19029.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/87 (48%), Positives = 58/87 (66%)
 Frame = -3

Query: 288 NMEAKKEAMLNRNFSIQDGDEFSAQCDGLNDFSNSSGSPVAFIRRTARRGICTVFSSHSE 109
           ++EAKKEAM +RN S+ DG+ F+A+ D   + SNSSGSP  F RR  RR + T+ SS+SE
Sbjct: 439 SIEAKKEAMFSRNCSVLDGNGFAAEFDIGCELSNSSGSPATFTRRNVRRKLDTILSSNSE 498

Query: 108 DEIFTDNIPKDINALSLDLCNGGFPGV 28
           DE+F+D  P     +S +L +G   GV
Sbjct: 499 DEVFSDCFP----VVSHNLLDGTDSGV 521


>ref|XP_003601043.1| ATPase family AAA domain-containing protein [Medicago truncatula]
            gi|355490091|gb|AES71294.1| ATPase family AAA
            domain-containing protein [Medicago truncatula]
          Length = 1283

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/70 (45%), Positives = 43/70 (61%)
 Frame = -3

Query: 285  MEAKKEAMLNRNFSIQDGDEFSAQCDGLNDFSNSSGSPVAFIRRTARRGICTVFSSHSED 106
            ++AKK  M+ RN SI D  E   QC  +++FSNSSGSPVA   +  RR +  V SS SE+
Sbjct: 794  IKAKKVEMIQRNGSITDYSELEIQCKVISEFSNSSGSPVASYLQNGRRKL-VVMSSDSEE 852

Query: 105  EIFTDNIPKD 76
            E   +  P+D
Sbjct: 853  EDSNNRYPRD 862


>ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784968 [Glycine max]
          Length = 1197

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/70 (44%), Positives = 41/70 (58%)
 Frame = -3

Query: 285 MEAKKEAMLNRNFSIQDGDEFSAQCDGLNDFSNSSGSPVAFIRRTARRGICTVFSSHSED 106
           +EAKK  M+ RN S+ D  E   Q + +++FSNSSGSP+   R   RR +  V SS SED
Sbjct: 715 IEAKKVEMIKRNGSLTDYSELEIQYNAISEFSNSSGSPLTSSRHNGRRKL-VVMSSDSED 773

Query: 105 EIFTDNIPKD 76
           E   +  P D
Sbjct: 774 EDSNNGYPVD 783


Top