BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046199
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE93451.1| photosystem II protein D2 [Xiphidium caeruleum]        164   9e-39
ref|YP_007475614.1| photosystem II protein D2 [Heliconia collins...   164   9e-39
ref|YP_007476346.1| PsbD (chloroplast) [Trithuria inconspicua] g...   164   9e-39
ref|YP_007474801.1| photosystem II protein D2 (chloroplast) [Tax...   164   9e-39
ref|YP_007374712.1| photosystem II D2 protein (chloroplast) [Equ...   164   9e-39

>gb|AGE93451.1| photosystem II protein D2 [Xiphidium caeruleum]
          Length = 353

 Score =  164 bits (414), Expect = 9e-39
 Identities = 78/79 (98%), Positives = 78/79 (98%)
 Frame = +3

Query: 3   YLEGCNFLTAAVSTPANSLAHSLLLLWGTEAQGDFTRWCQLGGLWTFVALHGAFGLIGFM 182
           YLEGCNFLTAAVSTPANSLAHSLLLLWG EAQGDFTRWCQLGGLWTFVALHGAFGLIGFM
Sbjct: 68  YLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFM 127

Query: 183 LRQFELARSVQLRPYNAIA 239
           LRQFELARSVQLRPYNAIA
Sbjct: 128 LRQFELARSVQLRPYNAIA 146


>ref|YP_007475614.1| photosystem II protein D2 [Heliconia collinsiana]
           gi|449326093|gb|AGE92679.1| photosystem II protein D2
           [Heliconia collinsiana]
          Length = 353

 Score =  164 bits (414), Expect = 9e-39
 Identities = 78/79 (98%), Positives = 78/79 (98%)
 Frame = +3

Query: 3   YLEGCNFLTAAVSTPANSLAHSLLLLWGTEAQGDFTRWCQLGGLWTFVALHGAFGLIGFM 182
           YLEGCNFLTAAVSTPANSLAHSLLLLWG EAQGDFTRWCQLGGLWTFVALHGAFGLIGFM
Sbjct: 68  YLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFM 127

Query: 183 LRQFELARSVQLRPYNAIA 239
           LRQFELARSVQLRPYNAIA
Sbjct: 128 LRQFELARSVQLRPYNAIA 146


>ref|YP_007476346.1| PsbD (chloroplast) [Trithuria inconspicua]
           gi|449713836|emb|CCJ32512.1| PsbD (chloroplast)
           [Trithuria inconspicua]
          Length = 353

 Score =  164 bits (414), Expect = 9e-39
 Identities = 78/79 (98%), Positives = 78/79 (98%)
 Frame = +3

Query: 3   YLEGCNFLTAAVSTPANSLAHSLLLLWGTEAQGDFTRWCQLGGLWTFVALHGAFGLIGFM 182
           YLEGCNFLTAAVSTPANSLAHSLLLLWG EAQGDFTRWCQLGGLWTFVALHGAFGLIGFM
Sbjct: 68  YLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFM 127

Query: 183 LRQFELARSVQLRPYNAIA 239
           LRQFELARSVQLRPYNAIA
Sbjct: 128 LRQFELARSVQLRPYNAIA 146


>ref|YP_007474801.1| photosystem II protein D2 (chloroplast) [Taxus mairei]
           gi|372863279|gb|AEX99350.1| photosystem II protein D2
           (chloroplast) [Taxus mairei] gi|372863356|gb|AEX99426.1|
           photosystem II protein D2 (chloroplast) [Taxus mairei]
           gi|372863520|gb|AEX99588.1| photosystem II protein D2
           (chloroplast) [Taxus mairei]
          Length = 353

 Score =  164 bits (414), Expect = 9e-39
 Identities = 78/79 (98%), Positives = 78/79 (98%)
 Frame = +3

Query: 3   YLEGCNFLTAAVSTPANSLAHSLLLLWGTEAQGDFTRWCQLGGLWTFVALHGAFGLIGFM 182
           YLEGCNFLTAAVSTPANSLAHSLLLLWG EAQGDFTRWCQLGGLWTFVALHGAFGLIGFM
Sbjct: 68  YLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFM 127

Query: 183 LRQFELARSVQLRPYNAIA 239
           LRQFELARSVQLRPYNAIA
Sbjct: 128 LRQFELARSVQLRPYNAIA 146


>ref|YP_007374712.1| photosystem II D2 protein (chloroplast) [Equisetum hyemale]
           gi|441017825|gb|AGC26625.1| photosystem II D2 protein
           (chloroplast) [Equisetum hyemale]
          Length = 353

 Score =  164 bits (414), Expect = 9e-39
 Identities = 78/79 (98%), Positives = 78/79 (98%)
 Frame = +3

Query: 3   YLEGCNFLTAAVSTPANSLAHSLLLLWGTEAQGDFTRWCQLGGLWTFVALHGAFGLIGFM 182
           YLEGCNFLTAAVSTPANSLAHSLLLLWG EAQGDFTRWCQLGGLWTFVALHGAFGLIGFM
Sbjct: 68  YLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFM 127

Query: 183 LRQFELARSVQLRPYNAIA 239
           LRQFELARSVQLRPYNAIA
Sbjct: 128 LRQFELARSVQLRPYNAIA 146