BLASTX nr result

ID: Coptis25_contig00046189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046189
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001130782.1| uncharacterized protein LOC100191886 [Zea ma...    71   1e-10
ref|XP_002310707.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|NP_001053253.1| Os04g0505400 [Oryza sativa Japonica Group] g...    69   3e-10
emb|CBI21372.3| unnamed protein product [Vitis vinifera]               69   4e-10
ref|XP_002278393.1| PREDICTED: UPF0481 protein At3g47200-like [V...    69   4e-10

>ref|NP_001130782.1| uncharacterized protein LOC100191886 [Zea mays]
           gi|194690100|gb|ACF79134.1| unknown [Zea mays]
           gi|223973229|gb|ACN30802.1| unknown [Zea mays]
           gi|413918861|gb|AFW58793.1| hypothetical protein
           ZEAMMB73_887560 [Zea mays]
          Length = 542

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/78 (43%), Positives = 48/78 (61%)
 Frame = -1

Query: 287 DASWVISIRKRLEKQSHPAPWNSWNRVPPSIYRVLNVIRQVDVDAYEPKVLSIGPLHRGN 108
           D+ WV++IR +L +    A    W R+  S+YRV   +R  D  AY P+ +SIGPLHRG 
Sbjct: 72  DSEWVVAIRGKLAQARSEAAALPWARL--SVYRVPKCLRDGDERAYTPQAVSIGPLHRGR 129

Query: 107 PKLAAMEKHKWRYFHDLL 54
            +L  M++HKWR  H +L
Sbjct: 130 RRLREMDRHKWRALHQVL 147


>ref|XP_002310707.1| predicted protein [Populus trichocarpa] gi|222853610|gb|EEE91157.1|
           predicted protein [Populus trichocarpa]
          Length = 533

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/78 (39%), Positives = 50/78 (64%)
 Frame = -1

Query: 287 DASWVISIRKRLEKQSHPAPWNSWNRVPPSIYRVLNVIRQVDVDAYEPKVLSIGPLHRGN 108
           D  WVISI+++L++        SW+++  SIYRV   +R+ D  AY P+++S+GP H G 
Sbjct: 79  DFDWVISIKEKLKEAGQEDAAGSWSKL--SIYRVPRYLREGDDKAYVPQIISLGPYHHGK 136

Query: 107 PKLAAMEKHKWRYFHDLL 54
            +L  M++HKWR  H ++
Sbjct: 137 KRLRQMDQHKWRCLHRVI 154


>ref|NP_001053253.1| Os04g0505400 [Oryza sativa Japonica Group]
           gi|32490273|emb|CAE05562.1| OSJNBb0116K07.15 [Oryza
           sativa Japonica Group] gi|113564824|dbj|BAF15167.1|
           Os04g0505400 [Oryza sativa Japonica Group]
           gi|116310257|emb|CAH67264.1| OSIGBa0145C12.1 [Oryza
           sativa Indica Group] gi|125548954|gb|EAY94776.1|
           hypothetical protein OsI_16556 [Oryza sativa Indica
           Group] gi|215686662|dbj|BAG88915.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 559

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/78 (44%), Positives = 47/78 (60%)
 Frame = -1

Query: 287 DASWVISIRKRLEKQSHPAPWNSWNRVPPSIYRVLNVIRQVDVDAYEPKVLSIGPLHRGN 108
           D  WV++IR +L +         W R+  S+YRV   +R  D  AY P+V+SIGPLHRG 
Sbjct: 88  DPEWVVAIRGKLAQARAEEAACPWARL--SVYRVPKSLRDGDERAYMPQVVSIGPLHRGR 145

Query: 107 PKLAAMEKHKWRYFHDLL 54
            +L  ME+HKWR  H +L
Sbjct: 146 RRLREMERHKWRALHHVL 163


>emb|CBI21372.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/78 (39%), Positives = 51/78 (65%)
 Frame = -1

Query: 287 DASWVISIRKRLEKQSHPAPWNSWNRVPPSIYRVLNVIRQVDVDAYEPKVLSIGPLHRGN 108
           D+ WVISI+++LE+       +SW ++   IYR+ + +R+ D  AY P+++S+GP H G 
Sbjct: 74  DSEWVISIKEKLEQAHQDDAADSWAKL--CIYRLPHYLREGDDKAYIPQIVSLGPYHHGR 131

Query: 107 PKLAAMEKHKWRYFHDLL 54
            +L  M++HKWR  H +L
Sbjct: 132 RRLRNMDRHKWRSLHHIL 149


>ref|XP_002278393.1| PREDICTED: UPF0481 protein At3g47200-like [Vitis vinifera]
          Length = 527

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/78 (39%), Positives = 51/78 (65%)
 Frame = -1

Query: 287 DASWVISIRKRLEKQSHPAPWNSWNRVPPSIYRVLNVIRQVDVDAYEPKVLSIGPLHRGN 108
           D+ WVISI+++LE+       +SW ++   IYR+ + +R+ D  AY P+++S+GP H G 
Sbjct: 74  DSEWVISIKEKLEQAHQDDAADSWAKL--CIYRLPHYLREGDDKAYIPQIVSLGPYHHGR 131

Query: 107 PKLAAMEKHKWRYFHDLL 54
            +L  M++HKWR  H +L
Sbjct: 132 RRLRNMDRHKWRSLHHIL 149


Top