BLASTX nr result

ID: Coptis25_contig00046178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046178
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275969.2| PREDICTED: putative multidrug resistance pro...   114   8e-24
ref|XP_002325260.1| multidrug/pheromone exporter, MDR family, AB...   110   2e-22
ref|XP_002309006.1| multidrug/pheromone exporter, MDR family, AB...   102   2e-20
gb|AFW66244.1| hypothetical protein ZEAMMB73_446753 [Zea mays]        102   3e-20
ref|XP_002279336.2| PREDICTED: ABC transporter B family member 1...   101   7e-20

>ref|XP_002275969.2| PREDICTED: putative multidrug resistance protein-like [Vitis
            vinifera]
          Length = 1283

 Score =  114 bits (285), Expect = 8e-24
 Identities = 56/87 (64%), Positives = 72/87 (82%)
 Frame = +2

Query: 2    RVIAETGSMTSNLSKGTTALNAIFMVLGRETQIDSDDPDGIKPQKIKGDIKLKEVVFVYP 181
            R+IAETGSMT++LSKGT AL ++FM L R++++D D+  GIKP+K+ GDI+ KEV F YP
Sbjct: 972  RLIAETGSMTADLSKGTNALKSVFMTLERKSKMDPDEIKGIKPEKLIGDIEFKEVDFFYP 1031

Query: 182  ERPKQIILMDLSLKIQAGKTVALVGQS 262
             RPKQ+ILM +SLK+ AGK VALVGQS
Sbjct: 1032 TRPKQMILMGVSLKVDAGKVVALVGQS 1058


>ref|XP_002325260.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222866694|gb|EEF03825.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1221

 Score =  110 bits (274), Expect = 2e-22
 Identities = 54/87 (62%), Positives = 70/87 (80%)
 Frame = +2

Query: 2    RVIAETGSMTSNLSKGTTALNAIFMVLGRETQIDSDDPDGIKPQKIKGDIKLKEVVFVYP 181
            RVIAET +MT++LSKGT+AL +IF +L RET+ID ++ DGIKP+ I G I+ K+V F+YP
Sbjct: 930  RVIAETATMTADLSKGTSALKSIFRILQRETKIDPENSDGIKPETINGGIEFKQVYFIYP 989

Query: 182  ERPKQIILMDLSLKIQAGKTVALVGQS 262
             RPKQIIL  + LKI+A K VALVG+S
Sbjct: 990  ARPKQIILRGMDLKIEASKIVALVGRS 1016



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/65 (38%), Positives = 41/65 (63%)
 Frame = +2

Query: 68  IFMVLGRETQIDSDDPDGIKPQKIKGDIKLKEVVFVYPERPKQIILMDLSLKIQAGKTVA 247
           IF ++ R  +IDS D  G     +KG+++ +++ F YP RP  ++L   +L++ AG+TV 
Sbjct: 316 IFEMIHRVPEIDSTDEQGKTISDVKGEVEFRDIDFEYPSRPGSLVLNKFNLRVMAGQTVG 375

Query: 248 LVGQS 262
           LVG S
Sbjct: 376 LVGAS 380


>ref|XP_002309006.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222854982|gb|EEE92529.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1239

 Score =  102 bits (255), Expect = 2e-20
 Identities = 48/87 (55%), Positives = 69/87 (79%)
 Frame = +2

Query: 2    RVIAETGSMTSNLSKGTTALNAIFMVLGRETQIDSDDPDGIKPQKIKGDIKLKEVVFVYP 181
            R+IAETG++T++LSKGT+AL ++F +L R T+ID +  DGIKP+KI G+I+ K+V F YP
Sbjct: 946  RLIAETGTITADLSKGTSALESVFRILKRRTKIDPEHSDGIKPEKINGEIEFKQVHFFYP 1005

Query: 182  ERPKQIILMDLSLKIQAGKTVALVGQS 262
             RPKQ+IL  ++L+I A K  A+VG+S
Sbjct: 1006 NRPKQMILTGVNLQIDAAKVAAIVGRS 1032


>gb|AFW66244.1| hypothetical protein ZEAMMB73_446753 [Zea mays]
          Length = 806

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/87 (56%), Positives = 65/87 (74%)
 Frame = +2

Query: 2   RVIAETGSMTSNLSKGTTALNAIFMVLGRETQIDSDDPDGIKPQKIKGDIKLKEVVFVYP 181
           RVIA+ GSMT++L+KG  A+ ++F VL RET+ID D+P+G KP+K+KG++ +K V F YP
Sbjct: 512 RVIADAGSMTTDLAKGADAVASVFAVLDRETEIDPDNPEGYKPEKLKGEVDIKGVDFAYP 571

Query: 182 ERPKQIILMDLSLKIQAGKTVALVGQS 262
            RP  II    SL IQ GK+ ALVGQS
Sbjct: 572 SRPDVIIFKGFSLSIQPGKSTALVGQS 598


>ref|XP_002279336.2| PREDICTED: ABC transporter B family member 15-like [Vitis vinifera]
          Length = 1252

 Score =  101 bits (251), Expect = 7e-20
 Identities = 50/89 (56%), Positives = 70/89 (78%), Gaps = 2/89 (2%)
 Frame = +2

Query: 2    RVIAETGSMTSNLSKGTTALNAIFMVLGRETQIDSDDPDGIKPQK--IKGDIKLKEVVFV 175
            ++IA+ GSMTS+LSKG+ A+ ++F +L R+++ID ++  GI P+K  +KG I+LK V F 
Sbjct: 955  KIIADAGSMTSDLSKGSNAIRSVFAILDRKSEIDPENSWGIDPEKTTVKGRIELKNVFFA 1014

Query: 176  YPERPKQIILMDLSLKIQAGKTVALVGQS 262
            YP RP Q+IL  LSLKI+AG+TVALVGQS
Sbjct: 1015 YPARPNQLILKGLSLKIEAGRTVALVGQS 1043



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/86 (38%), Positives = 52/86 (60%)
 Frame = +2

Query: 5   VIAETGSMTSNLSKGTTALNAIFMVLGRETQIDSDDPDGIKPQKIKGDIKLKEVVFVYPE 184
           V++   ++TS +S+ T A   IF ++ R   +DS+D  G     ++G+I+ K++ F YP 
Sbjct: 297 VLSALPNLTS-ISEATAAATRIFEMIDRVPALDSEDRKGKALAYVRGEIEFKDIHFSYPS 355

Query: 185 RPKQIILMDLSLKIQAGKTVALVGQS 262
           RP   IL    L+++AGKTV LVG S
Sbjct: 356 RPDSPILQGFDLRVRAGKTVGLVGGS 381


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