BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046171
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containi...   112   2e-23
emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]   112   2e-23
gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygr...   107   1e-21
ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group] g...   106   2e-21
ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [S...   105   4e-21

>ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Vitis vinifera]
          Length = 729

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/79 (67%), Positives = 63/79 (79%)
 Frame = +1

Query: 1   GVTKPDQATFTAVLSACSHAGLVKEGRQIFSSMVKDHKIKPGMDHFSCITDLLGRAGHLD 180
           G  KPDQATFTAVLSACSHAGLV +G +IF+SMV D+  +PG DH SCI DLLGRAG+L+
Sbjct: 579 GGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYLE 638

Query: 181 EAESLINTMPFRPDSTIWW 237
           EAE LIN+   +  S+IWW
Sbjct: 639 EAERLINSKHLKIVSSIWW 657


>emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]
          Length = 690

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/79 (67%), Positives = 63/79 (79%)
 Frame = +1

Query: 1   GVTKPDQATFTAVLSACSHAGLVKEGRQIFSSMVKDHKIKPGMDHFSCITDLLGRAGHLD 180
           G  KPDQATFTAVLSACSHAGLV +G +IF+SMV D+  +PG DH SCI DLLGRAG+L+
Sbjct: 540 GGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYLE 599

Query: 181 EAESLINTMPFRPDSTIWW 237
           EAE LIN+   +  S+IWW
Sbjct: 600 EAERLINSKHLKIVSSIWW 618


>gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  107 bits (266), Expect = 1e-21
 Identities = 47/75 (62%), Positives = 62/75 (82%)
 Frame = +1

Query: 10  KPDQATFTAVLSACSHAGLVKEGRQIFSSMVKDHKIKPGMDHFSCITDLLGRAGHLDEAE 189
           KPD+ TFT+VLSAC+H GLV+EGR+ F SM  D+ IKP ++H+SC  DLLGRAGHL+EAE
Sbjct: 497 KPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAE 556

Query: 190 SLINTMPFRPDSTIW 234
           ++I TMPF+P  ++W
Sbjct: 557 NVILTMPFQPGPSVW 571


>ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
           gi|13940614|gb|AAK50416.1|AC021891_17 Putative
           selenium-binding protein-like [Oryza sativa Japonica
           Group] gi|31431939|gb|AAP53645.1| pentatricopeptide,
           putative [Oryza sativa Japonica Group]
           gi|125574711|gb|EAZ15995.1| hypothetical protein
           OsJ_31439 [Oryza sativa Japonica Group]
           gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa
           Japonica Group]
          Length = 651

 Score =  106 bits (264), Expect = 2e-21
 Identities = 47/75 (62%), Positives = 57/75 (76%)
 Frame = +1

Query: 10  KPDQATFTAVLSACSHAGLVKEGRQIFSSMVKDHKIKPGMDHFSCITDLLGRAGHLDEAE 189
           KPD+ TF  VLSAC HAGLVKEGR+ FS M   + ++  M H+SC+ DLLGRAGHLDEAE
Sbjct: 458 KPDEITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAE 517

Query: 190 SLINTMPFRPDSTIW 234
            L+NTMP  PD+ +W
Sbjct: 518 QLVNTMPMEPDAVVW 532


>ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
           gi|241918518|gb|EER91662.1| hypothetical protein
           SORBIDRAFT_01g023020 [Sorghum bicolor]
          Length = 650

 Score =  105 bits (262), Expect = 4e-21
 Identities = 47/75 (62%), Positives = 58/75 (77%)
 Frame = +1

Query: 10  KPDQATFTAVLSACSHAGLVKEGRQIFSSMVKDHKIKPGMDHFSCITDLLGRAGHLDEAE 189
           +PD+ TF  VLSAC HAGLVKEGRQ FS M + + ++  M H+SC+ DLLGRAGHLDEAE
Sbjct: 454 QPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAE 513

Query: 190 SLINTMPFRPDSTIW 234
            L+NTMP  PD+ +W
Sbjct: 514 QLVNTMPMDPDAVVW 528