BLASTX nr result

ID: Coptis25_contig00046140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046140
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155594.1| PREDICTED: mediator-associated protein 1-lik...    62   6e-08
ref|XP_004174048.1| PREDICTED: mediator-associated protein 1-lik...    61   1e-07
ref|XP_004144578.1| PREDICTED: mediator-associated protein 1-lik...    61   1e-07

>ref|XP_004155594.1| PREDICTED: mediator-associated protein 1-like [Cucumis sativus]
          Length = 414

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/68 (51%), Positives = 47/68 (69%), Gaps = 4/68 (5%)
 Frame = +3

Query: 141 FQKKFSDEDEIVILKGLI----AKGHNWSTNLTGFTDFIKDSLGMVNVSKDQMCSKVRRL 308
           FQ+ +S++DEI IL G+I     KG + S ++  F DFIK SL  V+V+K Q+  K+RRL
Sbjct: 182 FQRLWSEDDEIAILNGMIDYSAKKGSDPSLDMNAFHDFIKKSLH-VDVTKAQLMDKIRRL 240

Query: 309 KDKYRNNA 332
           K KYRNNA
Sbjct: 241 KKKYRNNA 248


>ref|XP_004174048.1| PREDICTED: mediator-associated protein 1-like, partial [Cucumis
           sativus]
          Length = 261

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/71 (47%), Positives = 51/71 (71%), Gaps = 4/71 (5%)
 Frame = +3

Query: 135 SKFQKKFSDEDEIVILKGLI----AKGHNWSTNLTGFTDFIKDSLGMVNVSKDQMCSKVR 302
           S   + +S++DEI IL+G+I    AKG +  T++  F DFIK++L  V+VSK+Q+  KVR
Sbjct: 36  SGINRLWSEDDEISILQGMIDFELAKGSDPYTDMNQFLDFIKENLS-VDVSKNQLIDKVR 94

Query: 303 RLKDKYRNNAK 335
           RLK KY+NN++
Sbjct: 95  RLKKKYKNNSE 105


>ref|XP_004144578.1| PREDICTED: mediator-associated protein 1-like [Cucumis sativus]
          Length = 324

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/71 (47%), Positives = 51/71 (71%), Gaps = 4/71 (5%)
 Frame = +3

Query: 135 SKFQKKFSDEDEIVILKGLI----AKGHNWSTNLTGFTDFIKDSLGMVNVSKDQMCSKVR 302
           S   + +S++DEI IL+G+I    AKG +  T++  F DFIK++L  V+VSK+Q+  KVR
Sbjct: 90  SGINRLWSEDDEISILQGMIDFELAKGSDPYTDMNQFLDFIKENLS-VDVSKNQLIDKVR 148

Query: 303 RLKDKYRNNAK 335
           RLK KY+NN++
Sbjct: 149 RLKKKYKNNSE 159


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