BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046118
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containi...   139   3e-31
ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containi...   139   3e-31
gb|AAS80150.1| ACT11D09.4 [Cucumis melo]                              138   8e-31
ref|XP_003548343.1| PREDICTED: pentatricopeptide repeat-containi...   129   5e-28
tpg|DAA49887.1| TPA: hypothetical protein ZEAMMB73_769486 [Zea m...   124   1e-26

>ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Cucumis sativus]
          Length = 559

 Score =  139 bits (350), Expect = 3e-31
 Identities = 85/178 (47%), Positives = 106/178 (59%), Gaps = 2/178 (1%)
 Frame = -1

Query: 542 ALVYANLISGYLESDELERANELFHEFIDNPGDRHCVKDGYVYASFMEYYLDHNMEKEAM 363
           +LV+ NLISG+L    LE+ANELF E      +R  V DG V A+FM+++ +   EKEAM
Sbjct: 58  SLVFNNLISGFLNLGNLEKANELFDEL----KERCLVYDGVVNATFMDWFFNQGKEKEAM 113

Query: 362 ELYKSLLNRQLVMLSAVYNELLNVLLKHGKFVEANTLFDSIFKQDTP--FHTSNSHTFNI 189
           E YKSLL+RQ  M+ A  N LL VLLKH K  EA TLFD +    TP  F   NS TFNI
Sbjct: 114 ESYKSLLDRQFKMVPATCNVLLEVLLKHEKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNI 173

Query: 188 MVNHWFGVGKVSEALSVFNIYSDEPAPMYGKLGPLYRDVVVHNNIIGKLFDTGMVAEA 15
           MVN  F  GK +EA+  F     +P     K  P   DV  +NNII +  + GM+A+A
Sbjct: 174 MVNECFKHGKFAEAVETFRKVGTQP-----KSRPFAMDVAGYNNIIARFCEQGMMADA 226


>ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Cucumis sativus]
          Length = 871

 Score =  139 bits (350), Expect = 3e-31
 Identities = 85/178 (47%), Positives = 106/178 (59%), Gaps = 2/178 (1%)
 Frame = -1

Query: 542 ALVYANLISGYLESDELERANELFHEFIDNPGDRHCVKDGYVYASFMEYYLDHNMEKEAM 363
           +LV+ NLISG+L    LE+ANELF E      +R  V DG V A+FM+++ +   EKEAM
Sbjct: 224 SLVFNNLISGFLNLGNLEKANELFDEL----KERCLVYDGVVNATFMDWFFNQGKEKEAM 279

Query: 362 ELYKSLLNRQLVMLSAVYNELLNVLLKHGKFVEANTLFDSIFKQDTP--FHTSNSHTFNI 189
           E YKSLL+RQ  M+ A  N LL VLLKH K  EA TLFD +    TP  F   NS TFNI
Sbjct: 280 ESYKSLLDRQFKMVPATCNVLLEVLLKHEKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNI 339

Query: 188 MVNHWFGVGKVSEALSVFNIYSDEPAPMYGKLGPLYRDVVVHNNIIGKLFDTGMVAEA 15
           MVN  F  GK +EA+  F     +P     K  P   DV  +NNII +  + GM+A+A
Sbjct: 340 MVNECFKHGKFAEAVETFRKVGTQP-----KSRPFAMDVAGYNNIIARFCEQGMMADA 392


>gb|AAS80150.1| ACT11D09.4 [Cucumis melo]
          Length = 896

 Score =  138 bits (347), Expect = 8e-31
 Identities = 84/178 (47%), Positives = 106/178 (59%), Gaps = 2/178 (1%)
 Frame = -1

Query: 542 ALVYANLISGYLESDELERANELFHEFIDNPGDRHCVKDGYVYASFMEYYLDHNMEKEAM 363
           +LV+ NLISG+L    L +ANELF E      +R  V DG V A+FM+++ +   EKEAM
Sbjct: 250 SLVFNNLISGFLNLGNLVKANELFDEL----KERCLVYDGVVNATFMDWFFNQGKEKEAM 305

Query: 362 ELYKSLLNRQLVMLSAVYNELLNVLLKHGKFVEANTLFDSIFKQDTP--FHTSNSHTFNI 189
           E YKSLL+RQ  M+ A  N LL VLLKH K  EA TLFD +    TP  F   NS TFNI
Sbjct: 306 ESYKSLLDRQFKMVPATCNVLLEVLLKHEKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNI 365

Query: 188 MVNHWFGVGKVSEALSVFNIYSDEPAPMYGKLGPLYRDVVVHNNIIGKLFDTGMVAEA 15
           MVN  F +GK +EA+  F     +P     K  P   DV  +NNII +  + GM+A+A
Sbjct: 366 MVNECFKLGKFTEAVETFRKVGTQP-----KSRPFAMDVAGYNNIIARFCEQGMMADA 418


>ref|XP_003548343.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Glycine max]
          Length = 861

 Score =  129 bits (323), Expect = 5e-28
 Identities = 79/181 (43%), Positives = 103/181 (56%), Gaps = 2/181 (1%)
 Frame = -1

Query: 542 ALVYANLISGYLESDELERANELFHEFIDNPGDRHCVKDGYVYASFMEYYLDHNMEKEAM 363
           +LVY NLISG+L  D  ++A ELF E      +R  V DG V A+FME++     +KEAM
Sbjct: 224 SLVYNNLISGFLHLDNFDKAIELFEEL----KERCLVYDGVVNATFMEWFFGKGRDKEAM 279

Query: 362 ELYKSLLNRQLVMLSAVYNELLNVLLKHGKFVEANTLFDSIFKQDTP--FHTSNSHTFNI 189
           + Y+SLL+RQ  M  A  N LL VLLKH K  EA +LF  +    TP  F   NS TFNI
Sbjct: 280 DSYRSLLDRQFRMTPATCNVLLEVLLKHSKSNEAWSLFHLMLDNHTPPNFQAVNSDTFNI 339

Query: 188 MVNHWFGVGKVSEALSVFNIYSDEPAPMYGKLGPLYRDVVVHNNIIGKLFDTGMVAEAGE 9
           MVNH F +G   +AL+ F  +  +P        P   DV  +NNII +  + GM++ A  
Sbjct: 340 MVNHCFKLGNFEDALATFKKFGTKP-----NSKPFAMDVAGYNNIIARFSENGMLSHAET 394

Query: 8   L 6
           L
Sbjct: 395 L 395


>tpg|DAA49887.1| TPA: hypothetical protein ZEAMMB73_769486 [Zea mays]
          Length = 775

 Score =  124 bits (311), Expect = 1e-26
 Identities = 77/181 (42%), Positives = 106/181 (58%), Gaps = 2/181 (1%)
 Frame = -1

Query: 542 ALVYANLISGYLESDELERANELFHEFIDNPGDRHCVKDGYVYASFMEYYLDHNMEKEAM 363
           +LVY NLI+GY++ ++ +RA ELF+E      +R  V DG V+ +FME Y     +KEAM
Sbjct: 202 SLVYNNLIAGYIDLNDWDRAFELFNEL----AERCLVYDGVVHTTFMEGYWRQGKDKEAM 257

Query: 362 ELYKSLLNRQLVMLSAVYNELLNVLLKHGKFVEANTLFDSIFKQDTP--FHTSNSHTFNI 189
           + Y+SLL+R   M  A  N LL  L KHGK  EAN L++++    TP  F   N+ ++N+
Sbjct: 258 DNYQSLLDRGFKMTPATCNVLLETLFKHGKHKEANDLWETMIDNHTPPSFIGINAESYNV 317

Query: 188 MVNHWFGVGKVSEALSVFNIYSDEPAPMYGKLGPLYRDVVVHNNIIGKLFDTGMVAEAGE 9
           MVN  F  GK  EA+ VF+    +   M         DV   NNIIGKL + GM+AEA +
Sbjct: 318 MVNQCFREGKFQEAIEVFHRQPRKNVQM---------DVGCFNNIIGKLCENGMLAEAKK 368

Query: 8   L 6
           L
Sbjct: 369 L 369