BLASTX nr result

ID: Coptis25_contig00046043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046043
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002466153.1| hypothetical protein SORBIDRAFT_01g002325 [S...    59   3e-07
emb|CAN76280.1| hypothetical protein VITISV_013228 [Vitis vinifera]    58   9e-07
gb|AAS55772.2| hypothetical protein [Oryza sativa Japonica Group]      57   1e-06
ref|XP_002461200.1| hypothetical protein SORBIDRAFT_02g042745 [S...    57   1e-06
ref|XP_002461669.1| hypothetical protein SORBIDRAFT_02g006163 [S...    57   2e-06

>ref|XP_002466153.1| hypothetical protein SORBIDRAFT_01g002325 [Sorghum bicolor]
           gi|241920007|gb|EER93151.1| hypothetical protein
           SORBIDRAFT_01g002325 [Sorghum bicolor]
          Length = 763

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/87 (35%), Positives = 48/87 (55%)
 Frame = +1

Query: 1   VEFFFWGAIHSRTLTADALIHRRTKISPTCSMCKLHDETITHLFLHCSFALELWAKLMEP 180
           ++FFFW A+H R  TA+       +    C++C  HDETI HL + C F  E+W++L+  
Sbjct: 610 MKFFFWLALHGRLWTAERRRRHGLQAEAACALCSQHDETIDHLLIACVFPREIWSRLL-- 667

Query: 181 VMRAFPVLAQADSIQELLQRWSRRNRR 261
            +RA  +L  A +    LQ W   +R+
Sbjct: 668 -LRA-GLLHLAPTEGSALQEWWISSRK 692


>emb|CAN76280.1| hypothetical protein VITISV_013228 [Vitis vinifera]
          Length = 1821

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
 Frame = +1

Query: 7    FFFWGAIHSRTLTADALIHRRTKISPTCSMCKLHDETITHLFLHCSFALELWAKLMEPVM 186
            FF W A+ S+  T D L+ R   ++  C++CK ++ET  H+ +HC    +LW  L     
Sbjct: 1668 FFAWEAVWSKISTIDMLMRRGWSMANRCNLCKENEETANHILIHCGKTRDLWNLLFS--- 1724

Query: 187  RAFPVL-AQADSIQELLQRWSRRNRRNFGNKVWQL 288
             +F V+    DS++ LL  W  +      + VW++
Sbjct: 1725 -SFGVVWVLPDSVRNLLLEWKMKGMGKKRSVVWKM 1758


>gb|AAS55772.2| hypothetical protein [Oryza sativa Japonica Group]
          Length = 493

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
 Frame = +1

Query: 4   EFFFWGAIHSRTLTADALIHRRTKISPTCSMCKLHDETITHLFLHCSFALELWAKLMEPV 183
           +FF W  IH + LTAD L  R    S  C +C +  ET THL + C+FA ++W ++    
Sbjct: 352 KFFGWLMIHRKILTADKLQLRGWDNSHICPLCGVEPETATHLLMECAFAKQVWRQIWLKA 411

Query: 184 MRAFPVLAQADSIQELLQRWS-------RRNRRNF 267
               PV +  D   ++L+ WS       +  RRNF
Sbjct: 412 GLHMPVASTFDG--DMLRWWSTCRREMAKEQRRNF 444


>ref|XP_002461200.1| hypothetical protein SORBIDRAFT_02g042745 [Sorghum bicolor]
           gi|241924577|gb|EER97721.1| hypothetical protein
           SORBIDRAFT_02g042745 [Sorghum bicolor]
          Length = 230

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 21/58 (36%), Positives = 36/58 (62%)
 Frame = +1

Query: 1   VEFFFWGAIHSRTLTADALIHRRTKISPTCSMCKLHDETITHLFLHCSFALELWAKLM 174
           ++FFFW A+H R  TA+       +    C++C  HDET+ HL + C F+ ++W++L+
Sbjct: 79  MKFFFWLALHGRLWTAERRRRHGLRAEAACALCSQHDETVDHLLIACVFSRDVWSRLL 136


>ref|XP_002461669.1| hypothetical protein SORBIDRAFT_02g006163 [Sorghum bicolor]
           gi|241925046|gb|EER98190.1| hypothetical protein
           SORBIDRAFT_02g006163 [Sorghum bicolor]
          Length = 890

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/58 (44%), Positives = 34/58 (58%)
 Frame = +1

Query: 1   VEFFFWGAIHSRTLTADALIHRRTKISPTCSMCKLHDETITHLFLHCSFALELWAKLM 174
           V+FFFW A+H R  TA      R + S +CS+C   DET  HL L C F+ E W +L+
Sbjct: 759 VKFFFWLALHGRLWTAARRARHRLQQSASCSLCGQQDETSDHLLLSCVFSREAWFRLL 816


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