BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00046036
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 57   2e-06
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...    55   8e-06
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    54   1e-05

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
 Frame = +2

Query: 53  RAGGLGIQGPIIWNRAAYGGLIYKISCKDS--GLWITWTWAEHIKDKCFWTMTIPRDCSW 226
           + GGLGI+    WN+ A    I+ + C DS   +W TW  +  ++ + FWT+  P++CSW
Sbjct: 157 KEGGLGIKSIKEWNKIALLKHIWNL-CNDSDGSIWSTWIRSNLLRGRNFWTIKTPQNCSW 215

Query: 227 TWRCILKNRKYAIKLIKYSISTGDQALLW 313
            W  ILK R  A   +KY I  G    LW
Sbjct: 216 AWGKILKLRSLAWPKMKYIIGDGMTTSLW 244


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
 Frame = +2

Query: 59  GGLGIQGPIIWNRAAYGGLIYKISCKDSGLWITWTWAEHIKDKCFWTMTIPRDC-SWTWR 235
           GGLGI+  +  N+ +   LI+++  + S LW+ W W   I+   FW+        SW W+
Sbjct: 445 GGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWMWK 504

Query: 236 CILKNRKYAIKLIKYSISTGDQALLW 313
            +LK R  A  + K  I +G     W
Sbjct: 505 KLLKYRDVAKSMCKVEIKSGSSTSFW 530


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
 Frame = +2

Query: 59   GGLGIQGPIIWNRAAYGGLIYKISCKDSGLWITWTWAEHIKDKCFWTMTIPRDC-SWTWR 235
            GGLGI+  +  N+ +   LI+++  + S LW+ W W   I+   FW+        SW W+
Sbjct: 1014 GGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWMWK 1073

Query: 236  CILKNRKYAIKLIKYSISTGDQALLW 313
             +L  R  A  + K  I +G     W
Sbjct: 1074 KLLNYRDVAKSMCKVEIKSGSSTSFW 1099


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
 Frame = +2

Query: 53  RAGGLGIQGPIIWNRAAYGGLIYKI-SCKDSGLWITWTWAEHIKDKCFWTM-TIPRDCSW 226
           + GGLG+Q     N+ +   LI+++ SC+DS LW+ WT    +K + FW++ T     SW
Sbjct: 591 KEGGLGLQSLREANKVSSLKLIWRLLSCQDS-LWVKWTRMNLLKKESFWSIGTHSTLGSW 649

Query: 227 TWRCILKNRKYAIKLIKYSISTGDQALLW 313
            WR +LK+R+ A    K  ++ G     W
Sbjct: 650 IWRRLLKHREVAKSFCKIEVNNGVNTSFW 678