BLASTX nr result

ID: Coptis25_contig00045498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045498
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    61   1e-07
ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    60   2e-07
ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787...    59   4e-07
emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    59   5e-07

>ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|222856778|gb|EEE94325.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/87 (36%), Positives = 45/87 (51%)
 Frame = +2

Query: 83  YCKWKFPPSGYMKLNTDGSMKLNNVGYGGIVIDQHGNVLLTYTGGGTQRSIIFQELKAIE 262
           +C+WK P  G++KLNTDGS+   N G GG+  D  GN +  +    +   I   EL AI 
Sbjct: 164 WCQWKRPDFGWIKLNTDGSIDSENAGIGGLFRDYEGNAICGFVSKASGHDIFLVELWAIW 223

Query: 263 VGLILCQQHDFHKIKVCSDSLRAIQIL 343
            GL+L        + V SDSL  +  +
Sbjct: 224 RGLVLALNLHIQVLWVESDSLSVVNTI 250


>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/87 (36%), Positives = 47/87 (54%)
 Frame = +2

Query: 83  YCKWKFPPSGYMKLNTDGSMKLNNVGYGGIVIDQHGNVLLTYTGGGTQRSIIFQELKAIE 262
           +C WK P  G++KLNTDGS+   + G+GG++ D  GN +  +        I   EL AI 
Sbjct: 271 WCIWKKPDVGWIKLNTDGSVDRQHAGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIW 330

Query: 263 VGLILCQQHDFHKIKVCSDSLRAIQIL 343
            GL+L        I V SDS+ A++ +
Sbjct: 331 RGLVLALGLGIKVIWVESDSMSAVKTI 357


>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/84 (38%), Positives = 45/84 (53%)
 Frame = +2

Query: 92  WKFPPSGYMKLNTDGSMKLNNVGYGGIVIDQHGNVLLTYTGGGTQRSIIFQELKAIEVGL 271
           W+ P  G+ KLNTDGS+   N G+GG+  D +G+ +  Y     Q  I   EL AI  GL
Sbjct: 268 WEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGL 327

Query: 272 ILCQQHDFHKIKVCSDSLRAIQIL 343
           +L        I V SDS+ A++ +
Sbjct: 328 VLASGLGIKAIWVESDSMSAVKTI 351


>ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787629 [Glycine max]
          Length = 470

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/94 (32%), Positives = 47/94 (50%)
 Frame = +2

Query: 83  YCKWKFPPSGYMKLNTDGSMKLNNVGYGGIVIDQHGNVLLTYTGGGTQRSIIFQELKAIE 262
           +C+W  P  G+ KLNTDGS+  N V +GG++ D  G  +  +     Q  +   EL AI 
Sbjct: 305 WCEWTKPEFGWTKLNTDGSIHSNTVSFGGLLRDYRGEPICAFVSKAPQGDVFLAELWAIW 364

Query: 263 VGLILCQQHDFHKIKVCSDSLRAIQILKGSEDAP 364
            GL+L        I V SDS+  ++ +   +  P
Sbjct: 365 RGLVLSLGLGIKAIWVESDSMSVVRTVNRKQLCP 398


>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/84 (36%), Positives = 44/84 (52%)
 Frame = +2

Query: 92  WKFPPSGYMKLNTDGSMKLNNVGYGGIVIDQHGNVLLTYTGGGTQRSIIFQELKAIEVGL 271
           W+ P  G+ KLNTDGS+   N G+GG+  D +G+ +  Y     Q  I   EL AI  GL
Sbjct: 155 WEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGL 214

Query: 272 ILCQQHDFHKIKVCSDSLRAIQIL 343
           +L        I V SDS+  ++ +
Sbjct: 215 VLASGLGIKAIWVESDSMSVVKTI 238


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