BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045484
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD96948.1| hypothetical protein [Cleome spinosa]                   84   2e-14
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...    83   3e-14
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...    82   6e-14
gb|ABW81094.1| RT6non-ltr [Cleome spinosa]                             81   1e-13
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            79   3e-13

>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/85 (47%), Positives = 56/85 (65%)
 Frame = -3

Query: 260 FSVMINGAP*GYFAGKRGIRQGDPLSPYLFVLVMEILSSVIMQNINNKAIYLHSKYYIVR 81
           FSV ING   GYF G+RG+RQGDPLSPYLF++ ME+LS ++ +      + LH K +   
Sbjct: 85  FSVSINGELAGYFKGRRGLRQGDPLSPYLFIMSMEVLSRMLDRCAAESRLSLHPKCHSPV 144

Query: 80  LLHLAFVDDVLLFCKGDCAFMNAVK 6
           + HLAF DD+++F  G+   +  VK
Sbjct: 145 ITHLAFADDIMIFTSGETRSLLEVK 169


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 38/86 (44%), Positives = 56/86 (65%)
 Frame = -3

Query: 260 FSVMINGAP*GYFAGKRGIRQGDPLSPYLFVLVMEILSSVIMQNINNKAIYLHSKYYIVR 81
           FSVM+NG+  G+F   +G+RQGDPLSPYLFVL ME+ SS++    +   I+ H K   + 
Sbjct: 633 FSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIHYHPKTADLS 692

Query: 80  LLHLAFVDDVLLFCKGDCAFMNAVKE 3
           + HL F DDV++F  G  + ++ + E
Sbjct: 693 ISHLMFADDVMVFFDGGSSSLHGISE 718


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/86 (44%), Positives = 55/86 (63%)
 Frame = -3

Query: 260 FSVMINGAP*GYFAGKRGIRQGDPLSPYLFVLVMEILSSVIMQNINNKAIYLHSKYYIVR 81
           FSVM+NG+  G+F   +G+RQGDPLSPYLFVL ME+ SS++    +   I  H K   + 
Sbjct: 633 FSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIQYHPKTADLS 692

Query: 80  LLHLAFVDDVLLFCKGDCAFMNAVKE 3
           + HL F DDV++F  G  + ++ + E
Sbjct: 693 ISHLMFADDVMVFFDGGSSSLHGISE 718


>gb|ABW81094.1| RT6non-ltr [Cleome spinosa]
          Length = 459

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/85 (49%), Positives = 54/85 (63%)
 Frame = -3

Query: 260 FSVMINGAP*GYFAGKRGIRQGDPLSPYLFVLVMEILSSVIMQNINNKAIYLHSKYYIVR 81
           FS+ ING   G F GKRG+RQGDPLSPYLF++ ME+LS  + Q  +   + LHSK     
Sbjct: 2   FSININGELTGLFKGKRGLRQGDPLSPYLFIIAMEVLSRKLDQAASIGQLQLHSKCANPL 61

Query: 80  LLHLAFVDDVLLFCKGDCAFMNAVK 6
           L HL F DD+++F K     M AV+
Sbjct: 62  LTHLIFADDLVIFSKASRQSMQAVQ 86


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/86 (41%), Positives = 55/86 (63%)
 Frame = -3

Query: 260 FSVMINGAP*GYFAGKRGIRQGDPLSPYLFVLVMEILSSVIMQNINNKAIYLHSKYYIVR 81
           F++ +NGA  G+F   +G+RQGDPLSPYLFVL ME+ S ++    ++  I+ H K   + 
Sbjct: 492 FTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLS 551

Query: 80  LLHLAFVDDVLLFCKGDCAFMNAVKE 3
           + HL F DDV++F  G  + M+ + E
Sbjct: 552 ISHLMFADDVMIFFDGGSSSMHGICE 577