BLASTX nr result

ID: Coptis25_contig00045480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045480
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237850.1| expansin precursor [Glycine max] gi|27464177...   187   8e-46
ref|XP_002510588.1| Alpha-expansin 11 precursor, putative [Ricin...   187   8e-46
ref|XP_002285891.1| PREDICTED: expansin-A11 [Vitis vinifera] gi|...   187   8e-46
ref|XP_002300688.1| hypothetical protein POPTRDRAFT_709919 [Popu...   186   2e-45
gb|ABF85612.1| EXP1 [Malus hupehensis]                                183   1e-44

>ref|NP_001237850.1| expansin precursor [Glycine max]
           gi|27464177|gb|AAO15998.1|AF516879_1 expansin [Glycine
           max]
          Length = 255

 Score =  187 bits (475), Expect = 8e-46
 Identities = 82/91 (90%), Positives = 88/91 (96%)
 Frame = -2

Query: 274 AFSASGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGQCY 95
           AFS SGWT AHATFYGGSDASGTMGGACGYGNLY+TGYGTRTAALSTALFNDGASCGQCY
Sbjct: 23  AFSPSGWTNAHATFYGGSDASGTMGGACGYGNLYATGYGTRTAALSTALFNDGASCGQCY 82

Query: 94  RIICDYNADSRWCLRGKSVTVTATNFCPPNF 2
           +IICDY +DSRWC++G+SVTVTATNFCPPNF
Sbjct: 83  KIICDYKSDSRWCIKGRSVTVTATNFCPPNF 113


>ref|XP_002510588.1| Alpha-expansin 11 precursor, putative [Ricinus communis]
           gi|223551289|gb|EEF52775.1| Alpha-expansin 11 precursor,
           putative [Ricinus communis]
          Length = 256

 Score =  187 bits (475), Expect = 8e-46
 Identities = 81/93 (87%), Positives = 88/93 (94%)
 Frame = -2

Query: 280 VDAFSASGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGQ 101
           V+AFS SGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGQ
Sbjct: 22  VNAFSPSGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGQ 81

Query: 100 CYRIICDYNADSRWCLRGKSVTVTATNFCPPNF 2
           CY+I+CDY  D RWC++G S+T+TATNFCPPNF
Sbjct: 82  CYKIMCDYQTDPRWCIKGSSITITATNFCPPNF 114


>ref|XP_002285891.1| PREDICTED: expansin-A11 [Vitis vinifera]
           gi|302141731|emb|CBI18934.3| unnamed protein product
           [Vitis vinifera]
          Length = 256

 Score =  187 bits (475), Expect = 8e-46
 Identities = 82/93 (88%), Positives = 90/93 (96%)
 Frame = -2

Query: 280 VDAFSASGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGQ 101
           V+AF+ASGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGQ
Sbjct: 22  VNAFTASGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGQ 81

Query: 100 CYRIICDYNADSRWCLRGKSVTVTATNFCPPNF 2
           CY+IICDY +DS+WC +G SVT+TATNFCPPN+
Sbjct: 82  CYKIICDYQSDSQWCKKGASVTITATNFCPPNY 114


>ref|XP_002300688.1| hypothetical protein POPTRDRAFT_709919 [Populus trichocarpa]
           gi|222842414|gb|EEE79961.1| hypothetical protein
           POPTRDRAFT_709919 [Populus trichocarpa]
          Length = 256

 Score =  186 bits (472), Expect = 2e-45
 Identities = 80/93 (86%), Positives = 89/93 (95%)
 Frame = -2

Query: 280 VDAFSASGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGQ 101
           V+AF+ SGWTK HATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCG+
Sbjct: 22  VNAFAPSGWTKGHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGE 81

Query: 100 CYRIICDYNADSRWCLRGKSVTVTATNFCPPNF 2
           CYRI+CD+  DSRWC++G+SVT+TATNFCPPNF
Sbjct: 82  CYRIMCDFQTDSRWCIKGRSVTITATNFCPPNF 114


>gb|ABF85612.1| EXP1 [Malus hupehensis]
          Length = 256

 Score =  183 bits (465), Expect = 1e-44
 Identities = 81/93 (87%), Positives = 87/93 (93%)
 Frame = -2

Query: 280 VDAFSASGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGQ 101
           V AF+ASGWTK HATFYGGSDASGTMGGACGYGNLYST YGTRTAALSTALFN GASCGQ
Sbjct: 21  VTAFTASGWTKGHATFYGGSDASGTMGGACGYGNLYSTRYGTRTAALSTALFNGGASCGQ 80

Query: 100 CYRIICDYNADSRWCLRGKSVTVTATNFCPPNF 2
           CY+IICDYN DSRWC++ +SVT+TATNFCPPNF
Sbjct: 81  CYKIICDYNTDSRWCIKRRSVTITATNFCPPNF 113


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