BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045474
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera]   191   5e-47
gb|AAM91874.1| putative copia-like polyprotein [Oryza sativa Jap...   189   3e-46
emb|CAE75905.1| OSJNBa0088I22.18 [Oryza sativa Japonica Group]        189   3e-46
gb|ABA95230.1| retrotransposon protein, putative, unclassified [...   188   4e-46
emb|CAN59884.1| hypothetical protein VITISV_026166 [Vitis vinifera]   187   6e-46

>emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera]
          Length = 1493

 Score =  191 bits (485), Expect = 5e-47
 Identities = 95/165 (57%), Positives = 122/165 (73%)
 Frame = +3

Query: 3    KGFTQTPGTNYGETFAPKAKLTSVRLLISLVACHHWPLHQLDVKNAFLHGNLIEEIYMSP 182
            KGFTQT G +Y ETFAP AKL ++R+L+SL A   WPLHQ D+KNAFL+G L EE++M  
Sbjct: 1051 KGFTQTYGIDYTETFAPVAKLNTIRVLLSLAANLDWPLHQFDIKNAFLNGELEEEVFMML 1110

Query: 183  PPGFLLQGEDSRKVCRLLKSIYGLKQSPRV*FQRFSFVILSMGFARCQSDHTCFIHRSAS 362
            PPGF  + E++R VC+L KS+YGLKQSPR  F RF+ VI + G+ + QSDHT F  +S  
Sbjct: 1111 PPGFCKEEEETR-VCKLKKSLYGLKQSPRAWFDRFAKVIKNQGYQQGQSDHTMFFKQSND 1169

Query: 363  GLRTIVLVYVDDFIITGDDTLYIAKVKANLGTTFDIKDLGPMRYF 497
            G  TI++VYVDD I+TGDDT  + ++K  L T F++KDLG MRYF
Sbjct: 1170 GRMTILIVYVDDIILTGDDTGEVERLKKVLATEFEVKDLGQMRYF 1214


>gb|AAM91874.1| putative copia-like polyprotein [Oryza sativa Japonica Group]
          Length = 894

 Score =  189 bits (479), Expect = 3e-46
 Identities = 95/165 (57%), Positives = 119/165 (72%)
 Frame = +3

Query: 3   KGFTQTPGTNYGETFAPKAKLTSVRLLISLVACHHWPLHQLDVKNAFLHGNLIEEIYMSP 182
           KG++QT G +Y ETFAP AK+++VR LIS  A   WPLHQLDVKNAFLHG+L EE+YM  
Sbjct: 452 KGYSQTYGIDYDETFAPVAKMSTVRTLISCAANFDWPLHQLDVKNAFLHGDLQEEVYMEI 511

Query: 183 PPGFLLQGEDSRKVCRLLKSIYGLKQSPRV*FQRFSFVILSMGFARCQSDHTCFIHRSAS 362
           PPGF    +   KV RL KS+YGLKQSPR  F RF   +  MG+ +C  DHT F +R   
Sbjct: 512 PPGF-ATSQTEGKVLRLKKSLYGLKQSPRAWFDRFRRAMCGMGYKQCNGDHTVF-YRHNR 569

Query: 363 GLRTIVLVYVDDFIITGDDTLYIAKVKANLGTTFDIKDLGPMRYF 497
           GL+TI++VYVDD IITGDD L I+++K NL   F++KDLG ++YF
Sbjct: 570 GLKTILVVYVDDMIITGDDCLEISRLKQNLSKEFEVKDLGQLKYF 614


>emb|CAE75905.1| OSJNBa0088I22.18 [Oryza sativa Japonica Group]
          Length = 624

 Score =  189 bits (479), Expect = 3e-46
 Identities = 95/165 (57%), Positives = 119/165 (72%)
 Frame = +3

Query: 3   KGFTQTPGTNYGETFAPKAKLTSVRLLISLVACHHWPLHQLDVKNAFLHGNLIEEIYMSP 182
           KG++QT G +Y ETFAP AK+++VR LIS  A   WPLHQLDVKNAFLHG+L EE+YM  
Sbjct: 447 KGYSQTYGIDYDETFAPVAKISTVRTLISCAANFDWPLHQLDVKNAFLHGDLQEEVYMEI 506

Query: 183 PPGFLLQGEDSRKVCRLLKSIYGLKQSPRV*FQRFSFVILSMGFARCQSDHTCFIHRSAS 362
           PPGF    +   KV RL KS+YGLKQSPR  F RF   +  MG+ +C  DHT F +R   
Sbjct: 507 PPGF-ATSQTEGKVLRLKKSLYGLKQSPRAWFDRFRRAMCGMGYKQCNGDHTVF-YRHNR 564

Query: 363 GLRTIVLVYVDDFIITGDDTLYIAKVKANLGTTFDIKDLGPMRYF 497
           GL+TI++VYVDD IITGDD L I+++K NL   F++KDLG ++YF
Sbjct: 565 GLKTILVVYVDDMIITGDDCLKISRLKENLSKEFEVKDLGQLKYF 609


>gb|ABA95230.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 936

 Score =  188 bits (477), Expect = 4e-46
 Identities = 95/165 (57%), Positives = 118/165 (71%)
 Frame = +3

Query: 3   KGFTQTPGTNYGETFAPKAKLTSVRLLISLVACHHWPLHQLDVKNAFLHGNLIEEIYMSP 182
           KG++QT G +Y ETFAP AK++ VR LIS  A   WPLHQLDVKNAFLHG+L EE+YM  
Sbjct: 494 KGYSQTYGIDYDETFAPVAKMSMVRTLISCAANFDWPLHQLDVKNAFLHGDLQEEVYMEI 553

Query: 183 PPGFLLQGEDSRKVCRLLKSIYGLKQSPRV*FQRFSFVILSMGFARCQSDHTCFIHRSAS 362
           PPGF    +   KV RL KS+YGLKQSPR  F RF   +  MG+ +C  DHT F +R   
Sbjct: 554 PPGF-ATSQTEGKVLRLKKSLYGLKQSPRAWFDRFRRAMCGMGYKQCNGDHTVF-YRHNR 611

Query: 363 GLRTIVLVYVDDFIITGDDTLYIAKVKANLGTTFDIKDLGPMRYF 497
           GL+TI++VYVDD IITGDD L I+++K NL   F++KDLG ++YF
Sbjct: 612 GLKTILVVYVDDMIITGDDCLEISRLKQNLSKEFEVKDLGQLKYF 656


>emb|CAN59884.1| hypothetical protein VITISV_026166 [Vitis vinifera]
          Length = 6311

 Score =  187 bits (476), Expect = 6e-46
 Identities = 92/165 (55%), Positives = 119/165 (72%)
 Frame = +3

Query: 3    KGFTQTPGTNYGETFAPKAKLTSVRLLISLVACHHWPLHQLDVKNAFLHGNLIEEIYMSP 182
            KG+TQ  G++YG+TF+P AK+ SVRLL+S+ A   WPL+QLD+KNAFLHG+L EE+YM  
Sbjct: 1558 KGYTQVYGSDYGDTFSPVAKIASVRLLLSMAAMCSWPLYQLDIKNAFLHGDLAEEVYMEQ 1617

Query: 183  PPGFLLQGEDSRKVCRLLKSIYGLKQSPRV*FQRFSFVILSMGFARCQSDHTCFIHRSAS 362
            PPGF+ QGE S  VCRL +S+YGLKQSPR  F RFS+V+   G  R  SDH+ F H ++ 
Sbjct: 1618 PPGFVAQGE-SGLVCRLRRSLYGLKQSPRAWFGRFSYVVQEFGMLRSTSDHSVFYHHNSL 1676

Query: 363  GLRTIVLVYVDDFIITGDDTLYIAKVKANLGTTFDIKDLGPMRYF 497
            G    ++VYVDD +ITG D   I K+K +L T F  KDLG ++YF
Sbjct: 1677 GQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYF 1721