BLASTX nr result
ID: Coptis25_contig00045474
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00045474 (505 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera] 191 5e-47 gb|AAM91874.1| putative copia-like polyprotein [Oryza sativa Jap... 189 3e-46 emb|CAE75905.1| OSJNBa0088I22.18 [Oryza sativa Japonica Group] 189 3e-46 gb|ABA95230.1| retrotransposon protein, putative, unclassified [... 188 4e-46 emb|CAN59884.1| hypothetical protein VITISV_026166 [Vitis vinifera] 187 6e-46 >emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera] Length = 1493 Score = 191 bits (485), Expect = 5e-47 Identities = 95/165 (57%), Positives = 122/165 (73%) Frame = +3 Query: 3 KGFTQTPGTNYGETFAPKAKLTSVRLLISLVACHHWPLHQLDVKNAFLHGNLIEEIYMSP 182 KGFTQT G +Y ETFAP AKL ++R+L+SL A WPLHQ D+KNAFL+G L EE++M Sbjct: 1051 KGFTQTYGIDYTETFAPVAKLNTIRVLLSLAANLDWPLHQFDIKNAFLNGELEEEVFMML 1110 Query: 183 PPGFLLQGEDSRKVCRLLKSIYGLKQSPRV*FQRFSFVILSMGFARCQSDHTCFIHRSAS 362 PPGF + E++R VC+L KS+YGLKQSPR F RF+ VI + G+ + QSDHT F +S Sbjct: 1111 PPGFCKEEEETR-VCKLKKSLYGLKQSPRAWFDRFAKVIKNQGYQQGQSDHTMFFKQSND 1169 Query: 363 GLRTIVLVYVDDFIITGDDTLYIAKVKANLGTTFDIKDLGPMRYF 497 G TI++VYVDD I+TGDDT + ++K L T F++KDLG MRYF Sbjct: 1170 GRMTILIVYVDDIILTGDDTGEVERLKKVLATEFEVKDLGQMRYF 1214 >gb|AAM91874.1| putative copia-like polyprotein [Oryza sativa Japonica Group] Length = 894 Score = 189 bits (479), Expect = 3e-46 Identities = 95/165 (57%), Positives = 119/165 (72%) Frame = +3 Query: 3 KGFTQTPGTNYGETFAPKAKLTSVRLLISLVACHHWPLHQLDVKNAFLHGNLIEEIYMSP 182 KG++QT G +Y ETFAP AK+++VR LIS A WPLHQLDVKNAFLHG+L EE+YM Sbjct: 452 KGYSQTYGIDYDETFAPVAKMSTVRTLISCAANFDWPLHQLDVKNAFLHGDLQEEVYMEI 511 Query: 183 PPGFLLQGEDSRKVCRLLKSIYGLKQSPRV*FQRFSFVILSMGFARCQSDHTCFIHRSAS 362 PPGF + KV RL KS+YGLKQSPR F RF + MG+ +C DHT F +R Sbjct: 512 PPGF-ATSQTEGKVLRLKKSLYGLKQSPRAWFDRFRRAMCGMGYKQCNGDHTVF-YRHNR 569 Query: 363 GLRTIVLVYVDDFIITGDDTLYIAKVKANLGTTFDIKDLGPMRYF 497 GL+TI++VYVDD IITGDD L I+++K NL F++KDLG ++YF Sbjct: 570 GLKTILVVYVDDMIITGDDCLEISRLKQNLSKEFEVKDLGQLKYF 614 >emb|CAE75905.1| OSJNBa0088I22.18 [Oryza sativa Japonica Group] Length = 624 Score = 189 bits (479), Expect = 3e-46 Identities = 95/165 (57%), Positives = 119/165 (72%) Frame = +3 Query: 3 KGFTQTPGTNYGETFAPKAKLTSVRLLISLVACHHWPLHQLDVKNAFLHGNLIEEIYMSP 182 KG++QT G +Y ETFAP AK+++VR LIS A WPLHQLDVKNAFLHG+L EE+YM Sbjct: 447 KGYSQTYGIDYDETFAPVAKISTVRTLISCAANFDWPLHQLDVKNAFLHGDLQEEVYMEI 506 Query: 183 PPGFLLQGEDSRKVCRLLKSIYGLKQSPRV*FQRFSFVILSMGFARCQSDHTCFIHRSAS 362 PPGF + KV RL KS+YGLKQSPR F RF + MG+ +C DHT F +R Sbjct: 507 PPGF-ATSQTEGKVLRLKKSLYGLKQSPRAWFDRFRRAMCGMGYKQCNGDHTVF-YRHNR 564 Query: 363 GLRTIVLVYVDDFIITGDDTLYIAKVKANLGTTFDIKDLGPMRYF 497 GL+TI++VYVDD IITGDD L I+++K NL F++KDLG ++YF Sbjct: 565 GLKTILVVYVDDMIITGDDCLKISRLKENLSKEFEVKDLGQLKYF 609 >gb|ABA95230.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 936 Score = 188 bits (477), Expect = 4e-46 Identities = 95/165 (57%), Positives = 118/165 (71%) Frame = +3 Query: 3 KGFTQTPGTNYGETFAPKAKLTSVRLLISLVACHHWPLHQLDVKNAFLHGNLIEEIYMSP 182 KG++QT G +Y ETFAP AK++ VR LIS A WPLHQLDVKNAFLHG+L EE+YM Sbjct: 494 KGYSQTYGIDYDETFAPVAKMSMVRTLISCAANFDWPLHQLDVKNAFLHGDLQEEVYMEI 553 Query: 183 PPGFLLQGEDSRKVCRLLKSIYGLKQSPRV*FQRFSFVILSMGFARCQSDHTCFIHRSAS 362 PPGF + KV RL KS+YGLKQSPR F RF + MG+ +C DHT F +R Sbjct: 554 PPGF-ATSQTEGKVLRLKKSLYGLKQSPRAWFDRFRRAMCGMGYKQCNGDHTVF-YRHNR 611 Query: 363 GLRTIVLVYVDDFIITGDDTLYIAKVKANLGTTFDIKDLGPMRYF 497 GL+TI++VYVDD IITGDD L I+++K NL F++KDLG ++YF Sbjct: 612 GLKTILVVYVDDMIITGDDCLEISRLKQNLSKEFEVKDLGQLKYF 656 >emb|CAN59884.1| hypothetical protein VITISV_026166 [Vitis vinifera] Length = 6311 Score = 187 bits (476), Expect = 6e-46 Identities = 92/165 (55%), Positives = 119/165 (72%) Frame = +3 Query: 3 KGFTQTPGTNYGETFAPKAKLTSVRLLISLVACHHWPLHQLDVKNAFLHGNLIEEIYMSP 182 KG+TQ G++YG+TF+P AK+ SVRLL+S+ A WPL+QLD+KNAFLHG+L EE+YM Sbjct: 1558 KGYTQVYGSDYGDTFSPVAKIASVRLLLSMAAMCSWPLYQLDIKNAFLHGDLAEEVYMEQ 1617 Query: 183 PPGFLLQGEDSRKVCRLLKSIYGLKQSPRV*FQRFSFVILSMGFARCQSDHTCFIHRSAS 362 PPGF+ QGE S VCRL +S+YGLKQSPR F RFS+V+ G R SDH+ F H ++ Sbjct: 1618 PPGFVAQGE-SGLVCRLRRSLYGLKQSPRAWFGRFSYVVQEFGMLRSTSDHSVFYHHNSL 1676 Query: 363 GLRTIVLVYVDDFIITGDDTLYIAKVKANLGTTFDIKDLGPMRYF 497 G ++VYVDD +ITG D I K+K +L T F KDLG ++YF Sbjct: 1677 GQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYF 1721