BLASTX nr result
ID: Coptis25_contig00045459
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00045459 (290 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002333858.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2... 56 3e-06 ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|2... 55 6e-06 ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|2... 55 6e-06 gb|AAC62785.1| F11O4.11 [Arabidopsis thaliana] gi|7268192|emb|CA... 55 6e-06 >ref|XP_002333858.1| predicted protein [Populus trichocarpa] gi|222838785|gb|EEE77136.1| predicted protein [Populus trichocarpa] Length = 156 Score = 57.0 bits (136), Expect = 2e-06 Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 7/101 (6%) Frame = +2 Query: 2 FIGRRPSYG------YVKDVVSKTWRLQHKFTMQTQGETMFTFKFESEDDRRKVLDIG*- 160 F+G ++G ++ +++ WR + +QG +F FES + L G Sbjct: 39 FLGHDSTFGPTSFNKFINNLIDSEWRKYGNVKVYSQGSGVFVLDFESAHGKELALGEGPR 98 Query: 161 FHVASKLLVIRPWKLLIESEVSELKTLPIWVIMKRLPMELW 283 F+ SK +++PW + E+ ELK+ PIW+ + L + LW Sbjct: 99 FYDGSKPFILKPWSRDLSLEIKELKSAPIWIKLPNLTLHLW 139 >ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1| predicted protein [Populus trichocarpa] Length = 1046 Score = 56.2 bits (134), Expect = 3e-06 Identities = 25/94 (26%), Positives = 49/94 (52%) Frame = +2 Query: 2 FIGRRPSYGYVKDVVSKTWRLQHKFTMQTQGETMFTFKFESEDDRRKVLDIG*FHVASKL 181 F+G++ Y V + + W + + F F F+S D VL+ +H+A++ Sbjct: 161 FVGQKLPYPVVNSIAKRIWSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRP 220 Query: 182 LVIRPWKLLIESEVSELKTLPIWVIMKRLPMELW 283 LV++ W+ ++ +L T+P+WV + +P+E W Sbjct: 221 LVLKRWQPNMQFLKDDLATVPVWVWLYNVPLEYW 254 >ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|222874002|gb|EEF11133.1| predicted protein [Populus trichocarpa] Length = 302 Score = 55.1 bits (131), Expect = 6e-06 Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 7/101 (6%) Frame = +2 Query: 2 FIGRRPSYG------YVKDVVSKTWRLQHKFTMQTQGETMFTFKFESEDDRRKVLDIG*- 160 F+G ++G ++ +++ WR + ++G +F FES + L G Sbjct: 39 FLGHDSTFGPTSFNRFINNLIDSEWRKYGNVKVYSKGSGVFVLDFESAHGKELALGEGPR 98 Query: 161 FHVASKLLVIRPWKLLIESEVSELKTLPIWVIMKRLPMELW 283 F+ SK +++PW + E+ ELK+ PIW+ + L + LW Sbjct: 99 FYDGSKPFILKPWSRDLSLEIKELKSAPIWIKLPNLRLHLW 139 >ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|222838784|gb|EEE77135.1| predicted protein [Populus trichocarpa] Length = 335 Score = 55.1 bits (131), Expect = 6e-06 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 9/103 (8%) Frame = +2 Query: 2 FIGRRPSYG------YVKDVVSKTWRLQHKFTMQTQGETMFTFKFESEDDRRKVLDIG*- 160 F+G ++G ++ ++ WR + +QG +F FES KVL +G Sbjct: 39 FLGHDSTFGPTSFNRFINSLIDSEWRKYGNVKVYSQGSGVFVLDFESAHG--KVLALGEG 96 Query: 161 --FHVASKLLVIRPWKLLIESEVSELKTLPIWVIMKRLPMELW 283 F+ SK +++PW + E+ ELK+ P+W+ + L + LW Sbjct: 97 PRFYDGSKPFILKPWSRDLSLEIKELKSAPVWIKLPNLRLHLW 139 >gb|AAC62785.1| F11O4.11 [Arabidopsis thaliana] gi|7268192|emb|CAB77719.1| putative transposon protein [Arabidopsis thaliana] Length = 577 Score = 55.1 bits (131), Expect = 6e-06 Identities = 28/82 (34%), Positives = 44/82 (53%) Frame = +2 Query: 44 VSKTWRLQHKFTMQTQGETMFTFKFESEDDRRKVLDIG*FHVASKLLVIRPWKLLIESEV 223 +S W L+ K T G F F+FE E+D +KVLD +H +++++ WK +I Sbjct: 59 LSNRWNLKGKATGSDLGRGCFQFRFEYEEDLQKVLDNRPYHFGQWMVILQRWKPVISP-- 116 Query: 224 SELKTLPIWVIMKRLPMELWDK 289 S +P W+ ++ LPM W K Sbjct: 117 SFPSEIPFWIELQGLPMHYWIK 138