BLASTX nr result
ID: Coptis25_contig00045453
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00045453 (524 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 76 3e-12 gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago tr... 74 1e-11 ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|2... 70 2e-10 dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 69 4e-10 emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 69 4e-10 >gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] Length = 1213 Score = 75.9 bits (185), Expect = 3e-12 Identities = 45/113 (39%), Positives = 59/113 (52%), Gaps = 1/113 (0%) Frame = -3 Query: 339 MNVHLGCWNMRGFNMGFKQVEVKDMVRKFNLSIMGLVETRVKSAKRERIFNKTFTQWAME 160 M +L CWN+RGFN + K V+ G++ET VK K + N W+ Sbjct: 1 MCTNLFCWNIRGFNNVSHRSGFKKWVKANKPIFGGVIETHVKQPKDRKFINALLPGWSFV 60 Query: 159 ENYAQSDLGRIWFCWDPRVCSAVLLRKDGQHTTMEVNTIAGEEF-IVSIVYAS 4 ENYA SDLG+IW WDP V V++ K Q T EV + IVS+VYA+ Sbjct: 61 ENYAFSDLGKIWVMWDPSV-QVVVVAKSLQMITCEVLLPGSPSWIIVSVVYAA 112 >gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula] Length = 814 Score = 74.3 bits (181), Expect = 1e-11 Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 1/111 (0%) Frame = -3 Query: 336 NVHLGCWNMRGFNMGFKQVEVKDMVRKFNLSIMGLVETRVKSAKRERIFNKTFTQWAMEE 157 ++ L CWN+RG N FKQ E+K+ + K + LVETR+K+ K +I + F +W + Sbjct: 517 DMKLVCWNVRGCNKPFKQKEIKNFLLKNKFDMCILVETRIKADKFNKISSMIFKRWPVLN 576 Query: 156 NYAQSDLGRIWFCWDPRVCSAVLLRKDGQHTTMEVNTIAGEE-FIVSIVYA 7 NY + GRIW W+P V + Q EV+ + E F VYA Sbjct: 577 NYDSAANGRIWVSWNPTVLDVKPIASSAQAIHCEVDNLTSSECFNFVAVYA 627 >ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|222832345|gb|EEE70822.1| predicted protein [Populus trichocarpa] Length = 349 Score = 69.7 bits (169), Expect = 2e-10 Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 1/107 (0%) Frame = -3 Query: 327 LGCWNMRGFNMGFKQVEVKDMVRKFNLSIMGLVETRVKSAKRERIFNKTFTQWAMEENYA 148 +GCWN+RG N K E++ ++ + +++ GLVETRVK ++ + W+ NY Sbjct: 3 IGCWNIRGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKDNVSQLLLRSWSFLYNYD 62 Query: 147 QSDLGRIWFCWDPRVCSAVLLRKDGQHTTMEVNTIAGE-EFIVSIVY 10 S GRIW CW+ + Q + V +A F SI+Y Sbjct: 63 FSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIY 109 >dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis thaliana] Length = 893 Score = 68.9 bits (167), Expect = 4e-10 Identities = 41/112 (36%), Positives = 54/112 (48%) Frame = -3 Query: 339 MNVHLGCWNMRGFNMGFKQVEVKDMVRKFNLSIMGLVETRVKSAKRERIFNKTFTQWAME 160 M L CWN+RGFN+ + K GL+ET VK K ++ + W+ Sbjct: 1 MCTKLFCWNVRGFNISSHRRGFKKWFLLNKPLFGGLIETHVKQPKEKKFISNLLPGWSFV 60 Query: 159 ENYAQSDLGRIWFCWDPRVCSAVLLRKDGQHTTMEVNTIAGEEFIVSIVYAS 4 ENY S LG+IW WDP V V+ R T + + F+VSIVYAS Sbjct: 61 ENYEFSVLGKIWVLWDPSVKVVVIGRSLQMITCELLLPDSPSWFVVSIVYAS 112 >emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein [Arabidopsis thaliana] Length = 893 Score = 68.9 bits (167), Expect = 4e-10 Identities = 41/112 (36%), Positives = 54/112 (48%) Frame = -3 Query: 339 MNVHLGCWNMRGFNMGFKQVEVKDMVRKFNLSIMGLVETRVKSAKRERIFNKTFTQWAME 160 M L CWN+RGFN+ + K GL+ET VK K ++ + W+ Sbjct: 1 MCTKLFCWNVRGFNISSHRRGFKKWFLLNKPLFGGLIETHVKQPKEKKFISNLLPGWSFV 60 Query: 159 ENYAQSDLGRIWFCWDPRVCSAVLLRKDGQHTTMEVNTIAGEEFIVSIVYAS 4 ENY S LG+IW WDP V V+ R T + + F+VSIVYAS Sbjct: 61 ENYEFSVLGKIWVLWDPSVKVVVIGRSLQMITCELLLPDSPSWFVVSIVYAS 112