BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045453
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        76   3e-12
gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago tr...    74   1e-11
ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...    69   4e-10
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...    69   4e-10

>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 45/113 (39%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
 Frame = -3

Query: 339 MNVHLGCWNMRGFNMGFKQVEVKDMVRKFNLSIMGLVETRVKSAKRERIFNKTFTQWAME 160
           M  +L CWN+RGFN    +   K  V+       G++ET VK  K  +  N     W+  
Sbjct: 1   MCTNLFCWNIRGFNNVSHRSGFKKWVKANKPIFGGVIETHVKQPKDRKFINALLPGWSFV 60

Query: 159 ENYAQSDLGRIWFCWDPRVCSAVLLRKDGQHTTMEVNTIAGEEF-IVSIVYAS 4
           ENYA SDLG+IW  WDP V   V++ K  Q  T EV       + IVS+VYA+
Sbjct: 61  ENYAFSDLGKIWVMWDPSV-QVVVVAKSLQMITCEVLLPGSPSWIIVSVVYAA 112


>gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
          Length = 814

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
 Frame = -3

Query: 336 NVHLGCWNMRGFNMGFKQVEVKDMVRKFNLSIMGLVETRVKSAKRERIFNKTFTQWAMEE 157
           ++ L CWN+RG N  FKQ E+K+ + K    +  LVETR+K+ K  +I +  F +W +  
Sbjct: 517 DMKLVCWNVRGCNKPFKQKEIKNFLLKNKFDMCILVETRIKADKFNKISSMIFKRWPVLN 576

Query: 156 NYAQSDLGRIWFCWDPRVCSAVLLRKDGQHTTMEVNTIAGEE-FIVSIVYA 7
           NY  +  GRIW  W+P V     +    Q    EV+ +   E F    VYA
Sbjct: 577 NYDSAANGRIWVSWNPTVLDVKPIASSAQAIHCEVDNLTSSECFNFVAVYA 627


>ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|222832345|gb|EEE70822.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
 Frame = -3

Query: 327 LGCWNMRGFNMGFKQVEVKDMVRKFNLSIMGLVETRVKSAKRERIFNKTFTQWAMEENYA 148
           +GCWN+RG N   K  E++ ++ +  +++ GLVETRVK   ++ +       W+   NY 
Sbjct: 3   IGCWNIRGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKDNVSQLLLRSWSFLYNYD 62

Query: 147 QSDLGRIWFCWDPRVCSAVLLRKDGQHTTMEVNTIAGE-EFIVSIVY 10
            S  GRIW CW+       +     Q   + V  +A    F  SI+Y
Sbjct: 63  FSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIY 109


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 41/112 (36%), Positives = 54/112 (48%)
 Frame = -3

Query: 339 MNVHLGCWNMRGFNMGFKQVEVKDMVRKFNLSIMGLVETRVKSAKRERIFNKTFTQWAME 160
           M   L CWN+RGFN+   +   K           GL+ET VK  K ++  +     W+  
Sbjct: 1   MCTKLFCWNVRGFNISSHRRGFKKWFLLNKPLFGGLIETHVKQPKEKKFISNLLPGWSFV 60

Query: 159 ENYAQSDLGRIWFCWDPRVCSAVLLRKDGQHTTMEVNTIAGEEFIVSIVYAS 4
           ENY  S LG+IW  WDP V   V+ R     T   +   +   F+VSIVYAS
Sbjct: 61  ENYEFSVLGKIWVLWDPSVKVVVIGRSLQMITCELLLPDSPSWFVVSIVYAS 112


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 41/112 (36%), Positives = 54/112 (48%)
 Frame = -3

Query: 339 MNVHLGCWNMRGFNMGFKQVEVKDMVRKFNLSIMGLVETRVKSAKRERIFNKTFTQWAME 160
           M   L CWN+RGFN+   +   K           GL+ET VK  K ++  +     W+  
Sbjct: 1   MCTKLFCWNVRGFNISSHRRGFKKWFLLNKPLFGGLIETHVKQPKEKKFISNLLPGWSFV 60

Query: 159 ENYAQSDLGRIWFCWDPRVCSAVLLRKDGQHTTMEVNTIAGEEFIVSIVYAS 4
           ENY  S LG+IW  WDP V   V+ R     T   +   +   F+VSIVYAS
Sbjct: 61  ENYEFSVLGKIWVLWDPSVKVVVIGRSLQMITCELLLPDSPSWFVVSIVYAS 112