BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045437
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27471.3| unnamed protein product [Vitis vinifera]              193   1e-47
ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containi...   193   1e-47
emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]   193   1e-47
ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containi...   191   7e-47
ref|XP_003612041.1| Pentatricopeptide repeat-containing protein ...   174   5e-42

>emb|CBI27471.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score =  193 bits (491), Expect = 1e-47
 Identities = 89/141 (63%), Positives = 112/141 (79%)
 Frame = -3

Query: 428 GVEPNQITFTSALTACSHAGLLEEGKFLFENMQGTYSLTPSIEHYGCMVNILGRAGCLTE 249
           GVEPNQ+TFT  LTACSHAGL+ E K LFE+M+  +   PSIEHYGCMV++LGRAG L E
Sbjct: 298 GVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKE 357

Query: 248 AEQLIKTMPMNPNATILGALLSACSIHRNFDLGKRLGKTLIEADPNHAGRYIQLATTFSA 69
           AE+LI+ MP+ PNA I GALL+AC IH N +LGK++GK LI+ DP H GRYI LA+  +A
Sbjct: 358 AEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAA 417

Query: 68  TGEWDQAVKVRKMMKDRGVTK 6
            GEW+QA +VR+ MK++GV+K
Sbjct: 418 AGEWNQAARVRRQMKEQGVSK 438


>ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 622

 Score =  193 bits (491), Expect = 1e-47
 Identities = 89/141 (63%), Positives = 112/141 (79%)
 Frame = -3

Query: 428 GVEPNQITFTSALTACSHAGLLEEGKFLFENMQGTYSLTPSIEHYGCMVNILGRAGCLTE 249
           GVEPNQ+TFT  LTACSHAGL+ E K LFE+M+  +   PSIEHYGCMV++LGRAG L E
Sbjct: 346 GVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKE 405

Query: 248 AEQLIKTMPMNPNATILGALLSACSIHRNFDLGKRLGKTLIEADPNHAGRYIQLATTFSA 69
           AE+LI+ MP+ PNA I GALL+AC IH N +LGK++GK LI+ DP H GRYI LA+  +A
Sbjct: 406 AEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAA 465

Query: 68  TGEWDQAVKVRKMMKDRGVTK 6
            GEW+QA +VR+ MK++GV+K
Sbjct: 466 AGEWNQAARVRRQMKEQGVSK 486


>emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
          Length = 622

 Score =  193 bits (491), Expect = 1e-47
 Identities = 89/141 (63%), Positives = 112/141 (79%)
 Frame = -3

Query: 428 GVEPNQITFTSALTACSHAGLLEEGKFLFENMQGTYSLTPSIEHYGCMVNILGRAGCLTE 249
           GVEPNQ+TFT  LTACSHAGL+ E K LFE+M+  +   PSIEHYGCMV++LGRAG L E
Sbjct: 346 GVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKE 405

Query: 248 AEQLIKTMPMNPNATILGALLSACSIHRNFDLGKRLGKTLIEADPNHAGRYIQLATTFSA 69
           AE+LI+ MP+ PNA I GALL+AC IH N +LGK++GK LI+ DP H GRYI LA+  +A
Sbjct: 406 AEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAA 465

Query: 68  TGEWDQAVKVRKMMKDRGVTK 6
            GEW+QA +VR+ MK++GV+K
Sbjct: 466 AGEWNQAARVRRQMKEQGVSK 486


>ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 516

 Score =  191 bits (484), Expect = 7e-47
 Identities = 84/139 (60%), Positives = 112/139 (80%)
 Frame = -3

Query: 428 GVEPNQITFTSALTACSHAGLLEEGKFLFENMQGTYSLTPSIEHYGCMVNILGRAGCLTE 249
           G+ PN ITFT+ LTACSHAGL EEGK LFE+M   Y++ PS+EHYGCMV+++GRAG L E
Sbjct: 338 GINPNSITFTAILTACSHAGLTEEGKSLFESMSSVYNIKPSMEHYGCMVDLMGRAGLLKE 397

Query: 248 AEQLIKTMPMNPNATILGALLSACSIHRNFDLGKRLGKTLIEADPNHAGRYIQLATTFSA 69
           A + I++MP+ PNA I GALL+AC +H++F+LGK +GK LIE DP+H+GRYI LA+ ++A
Sbjct: 398 AREFIESMPVKPNAAIWGALLNACQLHKHFELGKEIGKILIELDPDHSGRYIHLASIYAA 457

Query: 68  TGEWDQAVKVRKMMKDRGV 12
            GEW+Q V+VR  +K RG+
Sbjct: 458 AGEWNQVVRVRSQIKHRGL 476


>ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513376|gb|AES94999.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 518

 Score =  174 bits (442), Expect = 5e-42
 Identities = 77/139 (55%), Positives = 108/139 (77%)
 Frame = -3

Query: 428 GVEPNQITFTSALTACSHAGLLEEGKFLFENMQGTYSLTPSIEHYGCMVNILGRAGCLTE 249
           G++P   TFT+ LTACSH GL+EEGK LFE+M   Y++ P +EHYGCMV++LGRAG L E
Sbjct: 339 GIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKPVMEHYGCMVDLLGRAGFLKE 398

Query: 248 AEQLIKTMPMNPNATILGALLSACSIHRNFDLGKRLGKTLIEADPNHAGRYIQLATTFSA 69
           A++ +++MP+ PNA I G+LL+AC +H++ +LGK +GK LIE DP H GRYI LA+  +A
Sbjct: 399 AKEFVESMPIKPNAAIWGSLLNACHLHKHLELGKEIGKFLIELDPEHDGRYIHLASIHAA 458

Query: 68  TGEWDQAVKVRKMMKDRGV 12
            GEWD+A +VR  +K++G+
Sbjct: 459 AGEWDEASQVRSHIKNKGL 477