BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045431
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532555.1| conserved hypothetical protein [Ricinus comm...    81   8e-14
ref|XP_003593990.1| F-box protein [Medicago truncatula] gi|35548...    57   1e-06
ref|XP_002318771.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002532555.1| conserved hypothetical protein [Ricinus communis]
           gi|223527710|gb|EEF29816.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 690

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 54/144 (37%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
 Frame = +3

Query: 87  PLAPT-PAPWLVFPSGNHARKLNFFNVSDPKKKSYIRSCEENLEKICLASMHGWWVMADL 263
           P AP  P PWLV+  G       F+ +SDPK+ + +R   E   KIC AS HGW   +D 
Sbjct: 15  PPAPAGPYPWLVYCHGKGREDQTFWTISDPKRTA-LRRIPELDSKICWASSHGWCFFSD- 72

Query: 264 WLSAEVHCFLWNPDTREKVDLPSWSV----------ERPEDIGMCILLSPPTNPDCMVLF 413
              A  H FLWNP T EK+DLP   V            P + G  ILL    +P  M L 
Sbjct: 73  --RARRHFFLWNPLTLEKIDLPDLQVYNIISSGYISSSPRETGCKILLFVGDHPSIMFL- 129

Query: 414 AGKKFFLTWQLGDKNWTKQNYELV 485
                    +LGDK WT+ +Y  +
Sbjct: 130 ---------ELGDKEWTEIDYSFL 144


>ref|XP_003593990.1| F-box protein [Medicago truncatula] gi|355483038|gb|AES64241.1|
           F-box protein [Medicago truncatula]
          Length = 566

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 5/125 (4%)
 Frame = +3

Query: 108 PWLVFPSGNHARKLNFFNVSDPKKKSYIRSCEENLEKICLASMHGWWVMADLWLSAEVHC 287
           PWL++ +G +     F ++SDP K +  R  E           HGW++  +  +S  V  
Sbjct: 7   PWLLYFTGENLDTQTFCSISDPTKCNTARIPEWARTSRIRTVQHGWYLW-EKTISKNVSS 65

Query: 288 F-LWNPDTREKVDLPSWSVERPEDIGMCILLSPPTNPD--CMV-LFAGK-KFFLTWQLGD 452
           F LWNP   +K+ LP          G CIL SPPT  D  C + LF  +      +QLGD
Sbjct: 66  FILWNPLNHKKIMLPPLK-HNGTPFGNCILTSPPTRNDEICSIYLFCSRCPSIFYYQLGD 124

Query: 453 KNWTK 467
           K  TK
Sbjct: 125 KQCTK 129


>ref|XP_002318771.1| predicted protein [Populus trichocarpa] gi|222859444|gb|EEE96991.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 43/151 (28%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
 Frame = +3

Query: 66  KQNKSFLPLAPTPAPWLVFPSGNHARKLNFFNVSDPKKKSYIRSCEENLEKICLASMHGW 245
           +Q+    P A    P LVF  G+  +   F+++S+ +   ++++      K+     +GW
Sbjct: 11  EQSLQCWPPAVGLLPCLVFFHGSSEKGQTFYDISECR--CHVKNIPGLQGKLIGTCSYGW 68

Query: 246 WVMADLWLSAEVHCFLWNPDTREKVDLPSWSVERPEDIGMCILLSPPTNPDCMVLFAGKK 425
            V+A   +S +  CFL NP + +K+ LPS + +       C+L SPP  P+C+V+F    
Sbjct: 69  LVIAGDSISDD--CFLLNPISTKKIQLPSLAPDFTWTD--CVLSSPPHRPECVVMFLNFG 124

Query: 426 FFL----TWQLGDKNWTKQNYELVGKDPDDT 506
           + +    + + GD  WT Q+ EL  +  DD+
Sbjct: 125 YGILNVKSCKPGDVEWTGQDLELHDEWFDDS 155