BLASTX nr result
ID: Coptis25_contig00045422
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00045422 (258 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003597616.1| hypothetical protein MTR_2g100200 [Medicago ... 68 9e-10 ref|XP_002307761.1| predicted protein [Populus trichocarpa] gi|2... 64 1e-08 emb|CBI40732.3| unnamed protein product [Vitis vinifera] 63 2e-08 ref|XP_002865400.1| pentatricopeptide repeat-containing protein ... 62 5e-08 emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera] 62 6e-08 >ref|XP_003597616.1| hypothetical protein MTR_2g100200 [Medicago truncatula] gi|124360397|gb|ABN08410.1| Pentatricopeptide repeat [Medicago truncatula] gi|355486664|gb|AES67867.1| hypothetical protein MTR_2g100200 [Medicago truncatula] Length = 527 Score = 67.8 bits (164), Expect = 9e-10 Identities = 39/82 (47%), Positives = 47/82 (57%) Frame = +1 Query: 4 KLNGNAAIESALSXXXXXXXXXXXXXXXXXXXXGGEAMVVFFHWAIKQPVVKLDLFRCYK 183 KL G AAIE ALS GGEAMV+FF+WA+KQP+V D+ Y Sbjct: 82 KLKGKAAIEQALSNVCIDVNVDIIGKVLNFGNLGGEAMVMFFNWALKQPMVPRDV-GSYH 140 Query: 184 VVLKGLGRRKYFSFMEFFLREM 249 V++K LGRRK+F FM L EM Sbjct: 141 VIVKALGRRKFFVFMMQVLDEM 162 >ref|XP_002307761.1| predicted protein [Populus trichocarpa] gi|222857210|gb|EEE94757.1| predicted protein [Populus trichocarpa] Length = 563 Score = 63.9 bits (154), Expect = 1e-08 Identities = 33/82 (40%), Positives = 46/82 (56%) Frame = +1 Query: 4 KLNGNAAIESALSXXXXXXXXXXXXXXXXXXXXGGEAMVVFFHWAIKQPVVKLDLFRCYK 183 K+ G + IE AL+ GGEAM++FF+WAIKQP++ D+ Y Sbjct: 113 KIKGKSGIERALTECSVDLSLDVVAEVLNRGNLGGEAMIMFFNWAIKQPMISKDV-DSYN 171 Query: 184 VVLKGLGRRKYFSFMEFFLREM 249 VV++ LGRRK+ FM FL E+ Sbjct: 172 VVIRALGRRKFIDFMVKFLHEL 193 >emb|CBI40732.3| unnamed protein product [Vitis vinifera] Length = 520 Score = 63.2 bits (152), Expect = 2e-08 Identities = 33/82 (40%), Positives = 46/82 (56%) Frame = +1 Query: 4 KLNGNAAIESALSXXXXXXXXXXXXXXXXXXXXGGEAMVVFFHWAIKQPVVKLDLFRCYK 183 +L G AAIE AL+ GGEAMV+FF+WA+KQP + D+ Y Sbjct: 71 RLRGKAAIELALTNVGIDLTIDIVSEVINRGNLGGEAMVIFFNWAVKQPTIPKDV-DTYN 129 Query: 184 VVLKGLGRRKYFSFMEFFLREM 249 V++K LGRRK+ F+ L++M Sbjct: 130 VIIKALGRRKFIEFVVKVLKDM 151 >ref|XP_002865400.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297311235|gb|EFH41659.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 675 Score = 62.0 bits (149), Expect = 5e-08 Identities = 36/83 (43%), Positives = 46/83 (55%) Frame = +1 Query: 4 KLNGNAAIESALSXXXXXXXXXXXXXXXXXXXXGGEAMVVFFHWAIKQPVVKLDLFRCYK 183 KL G +AI++ LS GEAMV FF+WAI++P V D+ Y Sbjct: 92 KLKGKSAIQNCLSSLGIDLSIDIVSDVLNRGNLSGEAMVTFFNWAIREPGVSKDV-DSYC 150 Query: 184 VVLKGLGRRKYFSFMEFFLREMV 252 V+L+ LGRRK+FSFM LR MV Sbjct: 151 VILRALGRRKFFSFMMDVLRGMV 173 >emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera] Length = 561 Score = 61.6 bits (148), Expect = 6e-08 Identities = 34/82 (41%), Positives = 45/82 (54%) Frame = +1 Query: 4 KLNGNAAIESALSXXXXXXXXXXXXXXXXXXXXGGEAMVVFFHWAIKQPVVKLDLFRCYK 183 +L G AAIE AL+ GGEAMV FF+WA+KQP + D+ Y Sbjct: 112 RLRGKAAIELALTNVGIDLTIDIVSEVXNRGNLGGEAMVXFFNWAVKQPTIPKDV-DTYN 170 Query: 184 VVLKGLGRRKYFSFMEFFLREM 249 V++K LGRRK+ F L++M Sbjct: 171 VIIKALGRRKFIEFXVXVLKDM 192