BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045422
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597616.1| hypothetical protein MTR_2g100200 [Medicago ...    68   9e-10
ref|XP_002307761.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
emb|CBI40732.3| unnamed protein product [Vitis vinifera]               63   2e-08
ref|XP_002865400.1| pentatricopeptide repeat-containing protein ...    62   5e-08
emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]    62   6e-08

>ref|XP_003597616.1| hypothetical protein MTR_2g100200 [Medicago truncatula]
           gi|124360397|gb|ABN08410.1| Pentatricopeptide repeat
           [Medicago truncatula] gi|355486664|gb|AES67867.1|
           hypothetical protein MTR_2g100200 [Medicago truncatula]
          Length = 527

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 39/82 (47%), Positives = 47/82 (57%)
 Frame = +1

Query: 4   KLNGNAAIESALSXXXXXXXXXXXXXXXXXXXXGGEAMVVFFHWAIKQPVVKLDLFRCYK 183
           KL G AAIE ALS                    GGEAMV+FF+WA+KQP+V  D+   Y 
Sbjct: 82  KLKGKAAIEQALSNVCIDVNVDIIGKVLNFGNLGGEAMVMFFNWALKQPMVPRDV-GSYH 140

Query: 184 VVLKGLGRRKYFSFMEFFLREM 249
           V++K LGRRK+F FM   L EM
Sbjct: 141 VIVKALGRRKFFVFMMQVLDEM 162


>ref|XP_002307761.1| predicted protein [Populus trichocarpa] gi|222857210|gb|EEE94757.1|
           predicted protein [Populus trichocarpa]
          Length = 563

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/82 (40%), Positives = 46/82 (56%)
 Frame = +1

Query: 4   KLNGNAAIESALSXXXXXXXXXXXXXXXXXXXXGGEAMVVFFHWAIKQPVVKLDLFRCYK 183
           K+ G + IE AL+                    GGEAM++FF+WAIKQP++  D+   Y 
Sbjct: 113 KIKGKSGIERALTECSVDLSLDVVAEVLNRGNLGGEAMIMFFNWAIKQPMISKDV-DSYN 171

Query: 184 VVLKGLGRRKYFSFMEFFLREM 249
           VV++ LGRRK+  FM  FL E+
Sbjct: 172 VVIRALGRRKFIDFMVKFLHEL 193


>emb|CBI40732.3| unnamed protein product [Vitis vinifera]
          Length = 520

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/82 (40%), Positives = 46/82 (56%)
 Frame = +1

Query: 4   KLNGNAAIESALSXXXXXXXXXXXXXXXXXXXXGGEAMVVFFHWAIKQPVVKLDLFRCYK 183
           +L G AAIE AL+                    GGEAMV+FF+WA+KQP +  D+   Y 
Sbjct: 71  RLRGKAAIELALTNVGIDLTIDIVSEVINRGNLGGEAMVIFFNWAVKQPTIPKDV-DTYN 129

Query: 184 VVLKGLGRRKYFSFMEFFLREM 249
           V++K LGRRK+  F+   L++M
Sbjct: 130 VIIKALGRRKFIEFVVKVLKDM 151


>ref|XP_002865400.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297311235|gb|EFH41659.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 675

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/83 (43%), Positives = 46/83 (55%)
 Frame = +1

Query: 4   KLNGNAAIESALSXXXXXXXXXXXXXXXXXXXXGGEAMVVFFHWAIKQPVVKLDLFRCYK 183
           KL G +AI++ LS                     GEAMV FF+WAI++P V  D+   Y 
Sbjct: 92  KLKGKSAIQNCLSSLGIDLSIDIVSDVLNRGNLSGEAMVTFFNWAIREPGVSKDV-DSYC 150

Query: 184 VVLKGLGRRKYFSFMEFFLREMV 252
           V+L+ LGRRK+FSFM   LR MV
Sbjct: 151 VILRALGRRKFFSFMMDVLRGMV 173


>emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]
          Length = 561

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/82 (41%), Positives = 45/82 (54%)
 Frame = +1

Query: 4   KLNGNAAIESALSXXXXXXXXXXXXXXXXXXXXGGEAMVVFFHWAIKQPVVKLDLFRCYK 183
           +L G AAIE AL+                    GGEAMV FF+WA+KQP +  D+   Y 
Sbjct: 112 RLRGKAAIELALTNVGIDLTIDIVSEVXNRGNLGGEAMVXFFNWAVKQPTIPKDV-DTYN 170

Query: 184 VVLKGLGRRKYFSFMEFFLREM 249
           V++K LGRRK+  F    L++M
Sbjct: 171 VIIKALGRRKFIEFXVXVLKDM 192