BLASTX nr result
ID: Coptis25_contig00045416
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00045416 (297 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280592.1| PREDICTED: cyclin-A2-4 [Vitis vinifera] gi|2... 71 8e-11 emb|CAN63857.1| hypothetical protein VITISV_017610 [Vitis vinifera] 69 4e-10 ref|XP_002281863.2| PREDICTED: cyclin-A2-2-like [Vitis vinifera] 67 2e-09 emb|CBI20929.3| unnamed protein product [Vitis vinifera] 67 2e-09 emb|CAN80559.1| hypothetical protein VITISV_002775 [Vitis vinifera] 67 2e-09 >ref|XP_002280592.1| PREDICTED: cyclin-A2-4 [Vitis vinifera] gi|297743331|emb|CBI36198.3| unnamed protein product [Vitis vinifera] Length = 490 Score = 71.2 bits (173), Expect = 8e-11 Identities = 45/93 (48%), Positives = 58/93 (62%), Gaps = 5/93 (5%) Frame = +1 Query: 34 STKSKCAVALPQLEELVSRKPSQ-HIRFSIEEKG----KHCKSSEYEVGVINIDSDQKNP 198 +T KC +A Q+E+ S SQ H + EKG K SS +V +IDSD K+P Sbjct: 165 TTLRKCGIADNQVEKHCSEIASQLHSSSNEAEKGSFDGKLTTSSNPDVK--DIDSDDKDP 222 Query: 199 QMCSLYAPEIYRDLRFKELTRRPSSSFMETLQQ 297 Q+CSLYAPEIY +L EL RRP S+FMET+Q+ Sbjct: 223 QLCSLYAPEIYNNLHVAELNRRPCSNFMETVQR 255 >emb|CAN63857.1| hypothetical protein VITISV_017610 [Vitis vinifera] Length = 872 Score = 68.9 bits (167), Expect = 4e-10 Identities = 44/93 (47%), Positives = 57/93 (61%), Gaps = 5/93 (5%) Frame = +1 Query: 34 STKSKCAVALPQLEELVSRKPSQ-HIRFSIEEKG----KHCKSSEYEVGVINIDSDQKNP 198 +T C +A Q+E+ S SQ H + EKG K SS +V +IDSD K+P Sbjct: 165 TTLRXCGIADNQVEKHCSEIASQLHSSSNEAEKGSFDGKLTTSSNPDVK--DIDSDDKDP 222 Query: 199 QMCSLYAPEIYRDLRFKELTRRPSSSFMETLQQ 297 Q+CSLYAPEIY +L EL RRP S+FMET+Q+ Sbjct: 223 QLCSLYAPEIYNNLHVAELNRRPCSNFMETVQR 255 >ref|XP_002281863.2| PREDICTED: cyclin-A2-2-like [Vitis vinifera] Length = 533 Score = 67.0 bits (162), Expect = 2e-09 Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 2/96 (2%) Frame = +1 Query: 16 IKRNMESTKSKCAVALPQLEELVSRKPSQHIRFSIEEKGKHCKSSEYEVG--VINIDSDQ 189 I+ S ++ QLEE S KP+QH S EE+ K+ G + +IDSD Sbjct: 202 IQHTFSSLRTSDVADPTQLEE-TSIKPAQHQILSEEEEDNLFKAQGSPNGPCIADIDSDH 260 Query: 190 KNPQMCSLYAPEIYRDLRFKELTRRPSSSFMETLQQ 297 K+PQMCSLYA +IY + +EL RRPS++FM+++Q+ Sbjct: 261 KDPQMCSLYASDIYDNFLCRELDRRPSANFMDSVQR 296 >emb|CBI20929.3| unnamed protein product [Vitis vinifera] Length = 401 Score = 67.0 bits (162), Expect = 2e-09 Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 2/96 (2%) Frame = +1 Query: 16 IKRNMESTKSKCAVALPQLEELVSRKPSQHIRFSIEEKGKHCKSSEYEVG--VINIDSDQ 189 I+ S ++ QLEE S KP+QH S EE+ K+ G + +IDSD Sbjct: 70 IQHTFSSLRTSDVADPTQLEE-TSIKPAQHQILSEEEEDNLFKAQGSPNGPCIADIDSDH 128 Query: 190 KNPQMCSLYAPEIYRDLRFKELTRRPSSSFMETLQQ 297 K+PQMCSLYA +IY + +EL RRPS++FM+++Q+ Sbjct: 129 KDPQMCSLYASDIYDNFLCRELDRRPSANFMDSVQR 164 >emb|CAN80559.1| hypothetical protein VITISV_002775 [Vitis vinifera] Length = 554 Score = 67.0 bits (162), Expect = 2e-09 Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 2/96 (2%) Frame = +1 Query: 16 IKRNMESTKSKCAVALPQLEELVSRKPSQHIRFSIEEKGKHCKSSEYEVG--VINIDSDQ 189 I+ S ++ QLEE S KP+QH S EE+ K+ G + +IDSD Sbjct: 252 IQHTFSSJRTSDVADPTQLEE-TSIKPAQHQILSEEEEDNLFKAQGSPNGPCIADIDSDH 310 Query: 190 KNPQMCSLYAPEIYRDLRFKELTRRPSSSFMETLQQ 297 K+PQMCSLYA +IY + +EL RRPS++FM+++Q+ Sbjct: 311 KDPQMCSLYASDIYDNFLCRELDRRPSANFMDSVQR 346