BLASTX nr result

ID: Coptis25_contig00045400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045400
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83560.1| hypothetical protein VITISV_024105 [Vitis vinifera]    59   3e-07
emb|CAN61743.1| hypothetical protein VITISV_038639 [Vitis vinifera]    56   3e-06

>emb|CAN83560.1| hypothetical protein VITISV_024105 [Vitis vinifera]
          Length = 394

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
 Frame = -3

Query: 225 SSNTHTRFHCDHCGHDNHTIDRCYKLHGYPP---KKSDASGSKPNSGGHAPSPAITQEQY 55
           S+ T  +FH  HC   NHTID+CY+LHG+PP   KK+D  G+  N      +   T EQY
Sbjct: 95  SNKTREKFHYTHCNGTNHTIDKCYRLHGFPPKNHKKNDKFGA--NIRTLPETLNFTPEQY 152

Query: 54  HKLLAMMATG 25
            +LL +   G
Sbjct: 153 QQLLTLFCDG 162


>emb|CAN61743.1| hypothetical protein VITISV_038639 [Vitis vinifera]
          Length = 481

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 15/70 (21%)
 Frame = -3

Query: 201 HCDHCGHDNHTIDRCYKLHGYPPKKSDASGSKPNSGGHA--PSPAI-------------T 67
           HC HCG++ HT+D+C++LHGYPP  +   G +  +  HA   +P +             T
Sbjct: 218 HCTHCGYNGHTMDKCFQLHGYPPGWNGPKGKRXMASAHAAITTPEVPNQNXXEQQKFCFT 277

Query: 66  QEQYHKLLAM 37
            E++HKL+ +
Sbjct: 278 PEEFHKLVXL 287


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