BLASTX nr result

ID: Coptis25_contig00045388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045388
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271781.2| PREDICTED: putative clathrin assembly protei...   101   5e-20
gb|AAL23930.1|AF420331_1 unknown [Laccaria bicolor]                   100   1e-19
emb|CBI36596.3| unnamed protein product [Vitis vinifera]               99   3e-19
gb|ABR16117.1| unknown [Picea sitchensis]                              99   4e-19
ref|XP_002533433.1| clathrin assembly protein, putative [Ricinus...    91   1e-16

>ref|XP_002271781.2| PREDICTED: putative clathrin assembly protein At5g35200-like [Vitis
           vinifera]
          Length = 542

 Score =  101 bits (252), Expect = 5e-20
 Identities = 51/84 (60%), Positives = 68/84 (80%), Gaps = 3/84 (3%)
 Frame = -1

Query: 243 LLGLDEISQDATELEEKNAHALAIINSEDPLNA---INVPVESTGWEVALVTTPSSNSTV 73
           LL LDE+ ++A+EL+EKNA  +AI  SE+P N+   +N+  ++TGWE+ALVT PSS+   
Sbjct: 372 LLDLDELIKEASELDEKNALGVAIFTSENPSNSANGLNLSCQTTGWELALVTAPSSSGAA 431

Query: 72  VAESKLAGGLDKLTLDSLYEDAMA 1
           VAESKLAGG+DKLTLDSLY+DA+A
Sbjct: 432 VAESKLAGGMDKLTLDSLYDDAIA 455


>gb|AAL23930.1|AF420331_1 unknown [Laccaria bicolor]
          Length = 370

 Score =  100 bits (249), Expect = 1e-19
 Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 6/84 (7%)
 Frame = -1

Query: 243 LLGLDEISQDATELEEKNAHALAIINSEDPLN------AINVPVESTGWEVALVTTPSSN 82
           LLGLDEIS D + L+EKNA ALAI+ + D  +      A+++P  +TGWE+ALVTT SSN
Sbjct: 72  LLGLDEISPDPSSLKEKNAMALAIVPTTDNSSNGTSNSALDIPNGATGWELALVTTSSSN 131

Query: 81  STVVAESKLAGGLDKLTLDSLYED 10
           S+V AESKLAGGLDKLTLDSLYED
Sbjct: 132 SSVQAESKLAGGLDKLTLDSLYED 155


>emb|CBI36596.3| unnamed protein product [Vitis vinifera]
          Length = 510

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/84 (59%), Positives = 67/84 (79%), Gaps = 3/84 (3%)
 Frame = -1

Query: 243 LLGLDEISQDATELEEKNAHALAIINSEDPLNA---INVPVESTGWEVALVTTPSSNSTV 73
           L  LDE+ ++A+EL+EKNA  +AI  SE+P N+   +N+  ++TGWE+ALVT PSS+   
Sbjct: 340 LQDLDELIKEASELDEKNALGVAIFTSENPSNSANGLNLSCQTTGWELALVTAPSSSGAA 399

Query: 72  VAESKLAGGLDKLTLDSLYEDAMA 1
           VAESKLAGG+DKLTLDSLY+DA+A
Sbjct: 400 VAESKLAGGMDKLTLDSLYDDAIA 423


>gb|ABR16117.1| unknown [Picea sitchensis]
          Length = 547

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 6/86 (6%)
 Frame = -1

Query: 243 LLGLDEISQDATELEEKNAHALAIINSEDPLN------AINVPVESTGWEVALVTTPSSN 82
           LLG D+IS D + LEEKNA ALAI+ + D  +      A ++P  +TGWE+ALVTT SSN
Sbjct: 364 LLGFDDISPDPSSLEEKNALALAIVPTTDNSSNGTSNSARDIPNGATGWELALVTTSSSN 423

Query: 81  STVVAESKLAGGLDKLTLDSLYEDAM 4
           S+V AESKLAGG DKLTLDSLYEDAM
Sbjct: 424 SSVQAESKLAGGFDKLTLDSLYEDAM 449


>ref|XP_002533433.1| clathrin assembly protein, putative [Ricinus communis]
           gi|223526721|gb|EEF28953.1| clathrin assembly protein,
           putative [Ricinus communis]
          Length = 555

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/83 (56%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
 Frame = -1

Query: 243 LLGLDEISQDATELEEKNAHALAIINSEDPL---NAINVPVESTGWEVALVTTPSSNSTV 73
           LLGL+E++Q+  EL+E+N  ALAI+ S++ L    +IN   ++T WE+ALVT PSSN   
Sbjct: 371 LLGLNELTQEEPELDEQNPLALAIVPSDNSLCSETSINSTSQTTSWELALVTAPSSNGAA 430

Query: 72  VAESKLAGGLDKLTLDSLYEDAM 4
           VA SKLAGG+DKLTLDSLY++ M
Sbjct: 431 VAASKLAGGMDKLTLDSLYDNVM 453


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