BLASTX nr result

ID: Coptis25_contig00045363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045363
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD40466.2| OSJNBa0067G20.22 [Oryza sativa Japonica Group] g...    61   8e-08
emb|CAN80038.1| hypothetical protein VITISV_040550 [Vitis vinifera]    58   7e-07
emb|CAN65498.1| hypothetical protein VITISV_028324 [Vitis vinifera]    58   7e-07
emb|CAN68550.1| hypothetical protein VITISV_027787 [Vitis vinifera]    58   9e-07
emb|CAN64640.1| hypothetical protein VITISV_033931 [Vitis vinifera]    58   9e-07

>emb|CAD40466.2| OSJNBa0067G20.22 [Oryza sativa Japonica Group]
           gi|38345962|emb|CAE04045.2| OSJNBb0062B06.3 [Oryza
           sativa Japonica Group]
          Length = 262

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
 Frame = +3

Query: 84  VIVSLGTDKSPGPDDFNT*FFRKCWHVM-EIVGEVWETSFLSNSL------KSGTEDISN 242
           +I  +  DK PGPD FN  F  KCWH++     E  +   L+NS       K   E +++
Sbjct: 30  LITLIPADKVPGPDGFNGFFMTKCWHIIAHFHAEATDLQVLNNSYITLVPKKPSPETVND 89

Query: 243 LRPISLIG-SV*DHTRMLSVRLKGVIFNLIAEKQGYQGSFVSGR 371
            RPISL+G S+   T++++ RL+GVI  ++ E Q Y+  F+ GR
Sbjct: 90  FRPISLMGFSLKFLTKLMADRLQGVILEVVGENQ-YE--FIKGR 130


>emb|CAN80038.1| hypothetical protein VITISV_040550 [Vitis vinifera]
          Length = 869

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 16/111 (14%)
 Frame = +3

Query: 87  IVSLGTDKSPGPDDFNT*FFRKCWH-----VMEIVGEVWETSFLSNSL----------KS 221
           ++ +  DK+PGPD F   F+++CW      V+++  E  E +  + SL          K 
Sbjct: 199 LMGMNGDKAPGPDGFTVAFWQRCWEIVKKDVLDMFKEFHEQNSFNKSLNHTFLVLLPKKG 258

Query: 222 GTEDISNLRPISLIGSV*D-HTRMLSVRLKGVIFNLIAEKQGYQGSFVSGR 371
           G ED+ + RPISL+G +     ++L+ RLK VI  +I+    YQ +F+ GR
Sbjct: 259 GVEDLGDYRPISLLGGLYKLLVKVLANRLKKVIRKVIS---SYQNAFIKGR 306


>emb|CAN65498.1| hypothetical protein VITISV_028324 [Vitis vinifera]
          Length = 572

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 16/114 (14%)
 Frame = +3

Query: 78  LEVIVSLGTDKSPGPDDFNT*FFRKCW-----HVMEIVGEVWETSFLSNSL--------- 215
           L  +  LG DK+PG D F   F++ CW      VM++  E+   + +  S          
Sbjct: 38  LRALSDLGGDKAPGSDGFTLAFWKTCWPVVGGEVMQVFEELHSQNVIFRSYNATFLVLIP 97

Query: 216 -KSGTEDISNLRPISLIGSV*D-HTRMLSVRLKGVIFNLIAEKQGYQGSFVSGR 371
            K G  D+ + RPISL+GS+    T++L+ RLKGV+  L++     Q +FV GR
Sbjct: 98  KKEGASDVLDYRPISLVGSLYKIITKVLANRLKGVMGKLVSNS---QNAFVEGR 148


>emb|CAN68550.1| hypothetical protein VITISV_027787 [Vitis vinifera]
          Length = 752

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 16/111 (14%)
 Frame = +3

Query: 87  IVSLGTDKSPGPDDFNT*FFRKCW-----HVMEIVGEVWETSFLSNSL----------KS 221
           ++ +  DK+PGPD F   F++ CW      ++++  E +E    S SL          K 
Sbjct: 199 LMGMNGDKAPGPDGFTVAFWQFCWEFVKEEIVDVFKEFFEEKSFSKSLNSTFLVLIPKKG 258

Query: 222 GTEDISNLRPISLIGSV*D-HTRMLSVRLKGVIFNLIAEKQGYQGSFVSGR 371
           G ED+ + RPISL+G V     ++L+ R+KGV+  +++     Q +FV GR
Sbjct: 259 GVEDLGDFRPISLLGGVYKLLAKVLANRIKGVLDKVVSPD---QNAFVKGR 306


>emb|CAN64640.1| hypothetical protein VITISV_033931 [Vitis vinifera]
          Length = 845

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 16/116 (13%)
 Frame = +3

Query: 72  GCLEVIVSLGTDKSPGPDDFNT*FFRKCW-----HVMEIVGEVWETSFLSNSL------- 215
           G LE ++ +  DK+PGPDDF   F++ CW      ++E+  E +E S    SL       
Sbjct: 453 GNLEALMEMSGDKAPGPDDFTMAFWQSCWGFVKGEILEMFKEFYEQSSFLKSLNNTFLVL 512

Query: 216 ---KSGTEDISNLRPISLIGSV*D-HTRMLSVRLKGVIFNLIAEKQGYQGSFVSGR 371
              K G  D+ + R ISL+G +     ++L+ RLK V+  ++A     Q +FV GR
Sbjct: 513 IPKKGGAADLGDFRLISLLGGLYKLMAKVLANRLKRVLNKVVAPT---QNAFVMGR 565


Top