BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045344
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACD63086.1| RNA polymerase II largest subunit [Liriodendron t...   136   2e-30
gb|ACD63084.1| RNA polymerase II largest subunit [Drimys winteri]     136   2e-30
dbj|BAK02300.1| predicted protein [Hordeum vulgare subsp. vulgare]    135   3e-30
gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japo...   135   3e-30
ref|NP_001054670.2| Os05g0151000 [Oryza sativa Japonica Group] g...   135   3e-30

>gb|ACD63086.1| RNA polymerase II largest subunit [Liriodendron tulipifera]
          Length = 1010

 Score =  136 bits (343), Expect = 2e-30
 Identities = 63/68 (92%), Positives = 66/68 (97%)
 Frame = -3

Query: 206 RGELLTGILCKKTLGTSTGSLIHVVWEEVGPDAARKFLGNTQWLVNYWLLQNGFSIGIGD 27
           RGELL G LCKKTLGTSTGSLIHV+WEEVGPDAARKFLG+TQWLVNYWLLQNGFSIGIGD
Sbjct: 546 RGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGD 605

Query: 26  TVADAATM 3
           T+ADAATM
Sbjct: 606 TIADAATM 613


>gb|ACD63084.1| RNA polymerase II largest subunit [Drimys winteri]
          Length = 1010

 Score =  136 bits (342), Expect = 2e-30
 Identities = 63/68 (92%), Positives = 66/68 (97%)
 Frame = -3

Query: 206 RGELLTGILCKKTLGTSTGSLIHVVWEEVGPDAARKFLGNTQWLVNYWLLQNGFSIGIGD 27
           RGELL G LCKKTLGTSTGSLIHV+WEEVGPDAARKFLG+TQWLVNYWLLQNGFSIGIGD
Sbjct: 546 RGELLCGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGD 605

Query: 26  TVADAATM 3
           T+ADAATM
Sbjct: 606 TIADAATM 613


>dbj|BAK02300.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1859

 Score =  135 bits (341), Expect = 3e-30
 Identities = 62/68 (91%), Positives = 67/68 (98%)
 Frame = -3

Query: 206 RGELLTGILCKKTLGTSTGSLIHVVWEEVGPDAARKFLGNTQWLVNYWLLQNGFSIGIGD 27
           +GELL+G LCKKTLGTSTGSLIHV+WEEVGPDAARKFLG+TQWLVNYWLLQNGFSIGIGD
Sbjct: 627 KGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGD 686

Query: 26  TVADAATM 3
           T+ADAATM
Sbjct: 687 TIADAATM 694


>gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japonica Group]
          Length = 804

 Score =  135 bits (341), Expect = 3e-30
 Identities = 62/68 (91%), Positives = 67/68 (98%)
 Frame = -3

Query: 206 RGELLTGILCKKTLGTSTGSLIHVVWEEVGPDAARKFLGNTQWLVNYWLLQNGFSIGIGD 27
           +GELL+G LCKKTLGTSTGSLIHV+WEEVGPDAARKFLG+TQWLVNYWLLQNGFSIGIGD
Sbjct: 558 KGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGD 617

Query: 26  TVADAATM 3
           T+ADAATM
Sbjct: 618 TIADAATM 625


>ref|NP_001054670.2| Os05g0151000 [Oryza sativa Japonica Group]
           gi|222630225|gb|EEE62357.1| hypothetical protein
           OsJ_17146 [Oryza sativa Japonica Group]
           gi|255676030|dbj|BAF16584.2| Os05g0151000 [Oryza sativa
           Japonica Group]
          Length = 1834

 Score =  135 bits (341), Expect = 3e-30
 Identities = 62/68 (91%), Positives = 67/68 (98%)
 Frame = -3

Query: 206 RGELLTGILCKKTLGTSTGSLIHVVWEEVGPDAARKFLGNTQWLVNYWLLQNGFSIGIGD 27
           +GELL+G LCKKTLGTSTGSLIHV+WEEVGPDAARKFLG+TQWLVNYWLLQNGFSIGIGD
Sbjct: 628 KGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGD 687

Query: 26  TVADAATM 3
           T+ADAATM
Sbjct: 688 TIADAATM 695