BLASTX nr result

ID: Coptis25_contig00045343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045343
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002986853.1| hypothetical protein SELMODRAFT_446760 [Sela...    57   1e-06
gb|ABR16978.1| unknown [Picea sitchensis]                              57   1e-06
gb|ADE76536.1| unknown [Picea sitchensis]                              57   2e-06
ref|XP_001772375.1| predicted protein [Physcomitrella patens sub...    57   2e-06
ref|XP_002969258.1| hypothetical protein SELMODRAFT_410210 [Sela...    56   3e-06

>ref|XP_002986853.1| hypothetical protein SELMODRAFT_446760 [Selaginella moellendorffii]
           gi|300145507|gb|EFJ12183.1| hypothetical protein
           SELMODRAFT_446760 [Selaginella moellendorffii]
          Length = 369

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
 Frame = +1

Query: 22  YRLIAYDMEKRVWIDLNVKMPFGDIRCP-----SLLICKGKLYLAGKIVEDYLIKSICIW 186
           Y+L+AYDM KR WI L+       +  P     SLL+C+G+L +A KI      K + IW
Sbjct: 221 YKLVAYDMGKRSWITLDHAQQLPALAIPNLASASLLVCRGRLVMAAKITGAAASKRVRIW 280

Query: 187 ELDMDKLKWVKVVEMPDEVLKK 252
           E D     W   +   D VL++
Sbjct: 281 EFDAQSCHWKDAIANSDPVLQE 302


>gb|ABR16978.1| unknown [Picea sitchensis]
          Length = 416

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
 Frame = +1

Query: 10  TSQGYRLIAYDMEKRVWIDLNVKMPFGDIRCPSLLICKGKLYLAGKIVE----------- 156
           T   Y ++ +D++   W++L V+MP   +  PSL+ C+G+L + G++             
Sbjct: 256 TELPYGVVVFDLKTESWVELRVQMP-SSLSSPSLVECRGRLLMIGRLSNMDQISPAADQT 314

Query: 157 DYLIKSICIWELDMDKLKWVKVVEMPDEVLKKIHSP 264
           +  I  I IWELD+   +WV++V +P E+ +    P
Sbjct: 315 ESNIPRIIIWELDVRHKEWVEIVRVPTEICRDFSVP 350


>gb|ADE76536.1| unknown [Picea sitchensis]
          Length = 389

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/75 (41%), Positives = 42/75 (56%)
 Frame = +1

Query: 28  LIAYDMEKRVWIDLNVKMPFGDIRCPSLLICKGKLYLAGKIVEDYLIKSICIWELDMDKL 207
           L+A+D++   W  + V MP   I CP +L  +G L L G I E  ++K I IWELD    
Sbjct: 249 LLAFDVDAGTWDLVEVTMP--PIVCPHILEHEGSLILVGGIEELGVLKKISIWELDESVK 306

Query: 208 KWVKVVEMPDEVLKK 252
           +W KV  MPD +  K
Sbjct: 307 QWQKVCSMPDHLFSK 321


>ref|XP_001772375.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162676362|gb|EDQ62846.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 462

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/81 (35%), Positives = 51/81 (62%)
 Frame = +1

Query: 10  TSQGYRLIAYDMEKRVWIDLNVKMPFGDIRCPSLLICKGKLYLAGKIVEDYLIKSICIWE 189
           T   + +IAYD+E+ +W +++V+MP   I  PSL+ C+G+L + G   E   +  I IWE
Sbjct: 275 TFSPFGVIAYDIERNLWDEVHVRMP-ACIVSPSLVECQGRLLMVGGCEEGNFL-GIRIWE 332

Query: 190 LDMDKLKWVKVVEMPDEVLKK 252
           L+  K+ WV++  MP ++ ++
Sbjct: 333 LERIKMVWVEIERMPRKLRRE 353


>ref|XP_002969258.1| hypothetical protein SELMODRAFT_410210 [Selaginella moellendorffii]
           gi|300162734|gb|EFJ29346.1| hypothetical protein
           SELMODRAFT_410210 [Selaginella moellendorffii]
          Length = 369

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
 Frame = +1

Query: 22  YRLIAYDMEKRVWIDLNVKMPFGDIRCP-----SLLICKGKLYLAGKIVEDYLIKSICIW 186
           Y+L+AYDM KR WI L+       +  P     SLL+C+G+L +A KI      K + IW
Sbjct: 221 YKLVAYDMGKRSWITLDHAQQLPALAIPNLASASLLVCRGRLVMAAKITGAAASKRVRIW 280

Query: 187 ELDMDKLKWVKVVEMPDEVLKK 252
           E D     W       D VL++
Sbjct: 281 EFDAQSCHWKDATANSDPVLQE 302


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