BLASTX nr result

ID: Coptis25_contig00045338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045338
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30084.3| unnamed protein product [Vitis vinifera]              114   9e-24
emb|CAN78589.1| hypothetical protein VITISV_026481 [Vitis vinifera]    75   8e-12
gb|AFW64917.1| LOW QUALITY PROTEIN: hypothetical protein ZEAMMB7...    74   1e-11
gb|AFW64916.1| hypothetical protein ZEAMMB73_820356 [Zea mays]         74   1e-11
ref|NP_001141639.2| uncharacterized protein LOC100273762 [Zea ma...    74   1e-11

>emb|CBI30084.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score =  114 bits (285), Expect = 9e-24
 Identities = 72/181 (39%), Positives = 95/181 (52%), Gaps = 3/181 (1%)
 Frame = +1

Query: 1   LDGCFILQFIYCITTDQQC-ELTTCCYSAAFLLRDLFLLENQLPFLILQALMRVRFIKDE 177
           +DGC +L FI C TT+ +  +L    ++AAF  +DLFLLENQLPF +L+ L+   F  +E
Sbjct: 179 VDGCSLLHFIRCYTTEGKLKDLPIKYHNAAFAQQDLFLLENQLPFRVLELLLEPGF--EE 236

Query: 178 GENMVNKFINQ--RISPPGRCSAGMPTGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXDTD 351
           G  M+ +FI       PP      + +  +                            T 
Sbjct: 237 GMQMIEQFIGSAAETDPPA-----VKSDNEEKPAHLLDLLRRRLLGNQTASETEAGKGTG 291

Query: 352 WHSFRSIKELKAVGINFKRSFTNSLTDIHFKSYKIYGEFSLPPIAIDDSTMPRFLNLIAY 531
           W+SFR++ ELKA GI FK + + SL DI F SY + G   LP I IDDST  RFLNLIAY
Sbjct: 292 WNSFRNVNELKAAGIRFKPAKSGSLRDISFNSYILLGFLKLPRITIDDSTKSRFLNLIAY 351

Query: 532 E 534
           E
Sbjct: 352 E 352


>emb|CAN78589.1| hypothetical protein VITISV_026481 [Vitis vinifera]
          Length = 310

 Score = 74.7 bits (182), Expect = 8e-12
 Identities = 38/62 (61%), Positives = 43/62 (69%)
 Frame = +1

Query: 349 DWHSFRSIKELKAVGINFKRSFTNSLTDIHFKSYKIYGEFSLPPIAIDDSTMPRFLNLIA 528
           DW SFR IKELKA GI+ KRS T+ LTDI FKS    G   LP I IDD T P+ LN++A
Sbjct: 132 DWPSFRHIKELKAAGIHLKRSRTSFLTDISFKSCFFCGYLKLPQIIIDDFTKPKVLNIVA 191

Query: 529 YE 534
           YE
Sbjct: 192 YE 193


>gb|AFW64917.1| LOW QUALITY PROTEIN: hypothetical protein ZEAMMB73_820356, partial
           [Zea mays]
          Length = 379

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 11/189 (5%)
 Frame = +1

Query: 1   LDGCFILQFIYCITTDQQCELTTC-----------CYSAAFLLRDLFLLENQLPFLILQA 147
           +DGCF+L+ +     D +                  Y   ++ RD+ +LENQLP ++L+ 
Sbjct: 130 VDGCFLLEVMRATVLDGKNTADYAPNDPIFSHHGVLYMVPYIRRDMLMLENQLPLILLEK 189

Query: 148 LMRVRFIKDEGENMVNKFINQRISPPGRCSAGMPTGGKXXXXXXXXXXXXXXXXXXXXXX 327
           L+ V   K    + +N+ + + +SP  R     PTG                        
Sbjct: 190 LVAVETGKPTNGDAINRMVLRFLSPTPRLP---PTGVGIGLHALDVHRRNMLYGHYQHRP 246

Query: 328 XXXXXDTDWHSFRSIKELKAVGINFKRSFTNSLTDIHFKSYKIYGEFSLPPIAIDDSTMP 507
                +TD    RS  EL   GI F++S ++SL DI F+    +G  S+P + +DDST  
Sbjct: 247 RRDVPETD--IIRSAVELYEAGIRFRKSVSDSLHDIRFR----HGVLSMPAVTVDDSTEY 300

Query: 508 RFLNLIAYE 534
            FLN++A+E
Sbjct: 301 MFLNMMAFE 309


>gb|AFW64916.1| hypothetical protein ZEAMMB73_820356 [Zea mays]
          Length = 450

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 11/189 (5%)
 Frame = +1

Query: 1   LDGCFILQFIYCITTDQQCELTTC-----------CYSAAFLLRDLFLLENQLPFLILQA 147
           +DGCF+L+ +     D +                  Y   ++ RD+ +LENQLP ++L+ 
Sbjct: 130 VDGCFLLEVMRATVLDGKNTADYAPNDPIFSHHGVLYMVPYIRRDMLMLENQLPLILLEK 189

Query: 148 LMRVRFIKDEGENMVNKFINQRISPPGRCSAGMPTGGKXXXXXXXXXXXXXXXXXXXXXX 327
           L+ V   K    + +N+ + + +SP  R     PTG                        
Sbjct: 190 LVAVETGKPTNGDAINRMVLRFLSPTPRLP---PTGVGIGLHALDVHRRNMLYGHYQHRP 246

Query: 328 XXXXXDTDWHSFRSIKELKAVGINFKRSFTNSLTDIHFKSYKIYGEFSLPPIAIDDSTMP 507
                +TD    RS  EL   GI F++S ++SL DI F+    +G  S+P + +DDST  
Sbjct: 247 RRDVPETD--IIRSAVELYEAGIRFRKSVSDSLHDIRFR----HGVLSMPAVTVDDSTEY 300

Query: 508 RFLNLIAYE 534
            FLN++A+E
Sbjct: 301 MFLNMMAFE 309


>ref|NP_001141639.2| uncharacterized protein LOC100273762 [Zea mays]
           gi|238908849|gb|ACF86771.2| unknown [Zea mays]
          Length = 450

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 11/189 (5%)
 Frame = +1

Query: 1   LDGCFILQFIYCITTDQQCELTTC-----------CYSAAFLLRDLFLLENQLPFLILQA 147
           +DGCF+L+ +     D +                  Y   ++ RD+ +LENQLP ++L+ 
Sbjct: 130 VDGCFLLEVMRATVLDGKNTADYAPNDPIFSHHGVLYMVPYIRRDMLMLENQLPLILLEK 189

Query: 148 LMRVRFIKDEGENMVNKFINQRISPPGRCSAGMPTGGKXXXXXXXXXXXXXXXXXXXXXX 327
           L+ V   K    + +N+ + + +SP  R     PTG                        
Sbjct: 190 LVAVETGKPTNGDAINRMVLRFLSPTPRLP---PTGVGIGLHALDVHRRNMLYGHYQHRP 246

Query: 328 XXXXXDTDWHSFRSIKELKAVGINFKRSFTNSLTDIHFKSYKIYGEFSLPPIAIDDSTMP 507
                +TD    RS  EL   GI F++S ++SL DI F+    +G  S+P + +DDST  
Sbjct: 247 RRDVPETD--IIRSAVELYEAGIRFRKSVSDSLHDIRFR----HGVLSMPAVTVDDSTEY 300

Query: 508 RFLNLIAYE 534
            FLN++A+E
Sbjct: 301 MFLNMMAFE 309