BLASTX nr result

ID: Coptis25_contig00045336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045336
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47052.1| unknown [Lotus japonicus]                              108   7e-41
ref|XP_002268255.2| PREDICTED: cystinosin homolog [Vitis vinifer...   110   2e-40
gb|AFK45532.1| unknown [Lotus japonicus]                              106   3e-40
ref|XP_003547683.1| PREDICTED: cystinosin homolog [Glycine max]       103   3e-39
ref|XP_002323998.1| predicted protein [Populus trichocarpa] gi|1...   102   1e-38

>gb|AFK47052.1| unknown [Lotus japonicus]
          Length = 271

 Score =  108 bits (270), Expect(2) = 7e-41
 Identities = 53/75 (70%), Positives = 59/75 (78%)
 Frame = +1

Query: 139 LFKFSYMITIQVVMTVIKYIPQAFMNFSRKSTVGWSIGNILLNLFGGVATYVQMAMQSID 318
           L+  S    IQ+ MTVIKYIPQA MNF RKST GWSIGNILL+  GG+  Y+QMAMQSID
Sbjct: 150 LWLLSIFTAIQISMTVIKYIPQAVMNFMRKSTDGWSIGNILLDFSGGLGNYLQMAMQSID 209

Query: 319 QGSWVNFNGNIGKAL 363
           QGSW+NF GNIGK L
Sbjct: 210 QGSWMNFYGNIGKLL 224



 Score = 84.0 bits (206), Expect(2) = 7e-41
 Identities = 40/53 (75%), Positives = 44/53 (83%)
 Frame = +3

Query: 3   YNTVLFFSPTVQKQYHEKYGFNEMIPVAANDVAFSIHAVLLTGITLIQVLIYD 161
           YN  L+FS T+QKQY EKYG  EMIPVAANDVAFSIHAVLLT I+L Q+ IYD
Sbjct: 63  YNASLYFSSTIQKQYREKYGEKEMIPVAANDVAFSIHAVLLTAISLFQIAIYD 115


>ref|XP_002268255.2| PREDICTED: cystinosin homolog [Vitis vinifera]
           gi|296081320|emb|CBI17702.3| unnamed protein product
           [Vitis vinifera]
          Length = 255

 Score =  110 bits (274), Expect(2) = 2e-40
 Identities = 56/75 (74%), Positives = 61/75 (81%)
 Frame = +1

Query: 139 LFKFSYMITIQVVMTVIKYIPQAFMNFSRKSTVGWSIGNILLNLFGGVATYVQMAMQSID 318
           L+  S   TIQVVMTVIKY+PQAFMNF RKST G+SIGNILL+L GGVA Y QM +QSID
Sbjct: 149 LWLISVFNTIQVVMTVIKYVPQAFMNFRRKSTDGFSIGNILLDLCGGVANYAQMTVQSID 208

Query: 319 QGSWVNFNGNIGKAL 363
           Q SWVNF GNIGK L
Sbjct: 209 QDSWVNFYGNIGKLL 223



 Score = 81.3 bits (199), Expect(2) = 2e-40
 Identities = 37/53 (69%), Positives = 43/53 (81%)
 Frame = +3

Query: 3   YNTVLFFSPTVQKQYHEKYGFNEMIPVAANDVAFSIHAVLLTGITLIQVLIYD 161
           YN VL+FS  VQ+QY EKYG  +MIPVAANDVAFSIHAV+LT  TL Q+ IY+
Sbjct: 62  YNAVLYFSSAVQRQYREKYGIGQMIPVAANDVAFSIHAVILTAFTLFQIAIYE 114


>gb|AFK45532.1| unknown [Lotus japonicus]
          Length = 271

 Score =  106 bits (265), Expect(2) = 3e-40
 Identities = 52/75 (69%), Positives = 58/75 (77%)
 Frame = +1

Query: 139 LFKFSYMITIQVVMTVIKYIPQAFMNFSRKSTVGWSIGNILLNLFGGVATYVQMAMQSID 318
           L+  S    IQ+ MTVIKYIPQA MNF RKST GWSIGNILL+  GG+  Y+QMAMQSID
Sbjct: 150 LWLLSIFTAIQISMTVIKYIPQAVMNFMRKSTDGWSIGNILLDFSGGLGNYLQMAMQSID 209

Query: 319 QGSWVNFNGNIGKAL 363
            GSW+NF GNIGK L
Sbjct: 210 HGSWMNFYGNIGKLL 224



 Score = 84.0 bits (206), Expect(2) = 3e-40
 Identities = 40/53 (75%), Positives = 44/53 (83%)
 Frame = +3

Query: 3   YNTVLFFSPTVQKQYHEKYGFNEMIPVAANDVAFSIHAVLLTGITLIQVLIYD 161
           YN  L+FS T+QKQY EKYG  EMIPVAANDVAFSIHAVLLT I+L Q+ IYD
Sbjct: 63  YNASLYFSSTIQKQYREKYGEKEMIPVAANDVAFSIHAVLLTAISLFQIAIYD 115


>ref|XP_003547683.1| PREDICTED: cystinosin homolog [Glycine max]
          Length = 277

 Score =  103 bits (256), Expect(2) = 3e-39
 Identities = 53/75 (70%), Positives = 58/75 (77%)
 Frame = +1

Query: 139 LFKFSYMITIQVVMTVIKYIPQAFMNFSRKSTVGWSIGNILLNLFGGVATYVQMAMQSID 318
           L+  S   TIQVVMT IKYIPQA MNF RKST G+SIGNILL+  GG+A Y QM +QSID
Sbjct: 149 LWLLSVFNTIQVVMTTIKYIPQAVMNFLRKSTDGFSIGNILLDFSGGIANYGQMVVQSID 208

Query: 319 QGSWVNFNGNIGKAL 363
           Q SWVNF GNIGK L
Sbjct: 209 QDSWVNFYGNIGKVL 223



 Score = 84.0 bits (206), Expect(2) = 3e-39
 Identities = 39/53 (73%), Positives = 44/53 (83%)
 Frame = +3

Query: 3   YNTVLFFSPTVQKQYHEKYGFNEMIPVAANDVAFSIHAVLLTGITLIQVLIYD 161
           YN  L+FS  +QKQY EKYG+ EMIPVAANDVAFSIHAVLLT ITL Q+ IY+
Sbjct: 62  YNASLYFSSAIQKQYFEKYGYGEMIPVAANDVAFSIHAVLLTAITLFQIAIYE 114


>ref|XP_002323998.1| predicted protein [Populus trichocarpa] gi|118485298|gb|ABK94508.1|
           unknown [Populus trichocarpa]
           gi|222867000|gb|EEF04131.1| predicted protein [Populus
           trichocarpa]
          Length = 274

 Score =  102 bits (255), Expect(2) = 1e-38
 Identities = 52/75 (69%), Positives = 57/75 (76%)
 Frame = +1

Query: 139 LFKFSYMITIQVVMTVIKYIPQAFMNFSRKSTVGWSIGNILLNLFGGVATYVQMAMQSID 318
           L+  S   +IQV MTVIKYIPQ  MNF RKST G+SIGNILL+  GGV  Y QMA+QSID
Sbjct: 149 LWLISIFNSIQVFMTVIKYIPQVIMNFMRKSTDGFSIGNILLDCLGGVTNYAQMAVQSID 208

Query: 319 QGSWVNFNGNIGKAL 363
           Q SWVNF GNIGK L
Sbjct: 209 QNSWVNFYGNIGKTL 223



 Score = 82.4 bits (202), Expect(2) = 1e-38
 Identities = 39/53 (73%), Positives = 43/53 (81%)
 Frame = +3

Query: 3   YNTVLFFSPTVQKQYHEKYGFNEMIPVAANDVAFSIHAVLLTGITLIQVLIYD 161
           YN  L+FS  +Q QY EKYG  EMIPVAANDVAFSIHAVLLT ITL Q++IYD
Sbjct: 62  YNASLYFSSAIQHQYFEKYGHGEMIPVAANDVAFSIHAVLLTAITLFQIVIYD 114


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