BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045334
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containi...   174   9e-42
emb|CBI36131.3| unnamed protein product [Vitis vinifera]              174   9e-42
ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containi...   166   1e-39
ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat...   164   7e-39
dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]    164   9e-39

>ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  174 bits (440), Expect = 9e-42
 Identities = 85/110 (77%), Positives = 96/110 (87%)
 Frame = +2

Query: 2   SGVWGALLNSCKLHGNVELGEEALLRLIDLEPRDAGNYVILSNIYAQAGKWEGVARVRKL 181
           SGVWGALLNSCK+H NVELGE AL RLI+LEP DAGNYVILSNIYAQAGKWEGVA++RKL
Sbjct: 445 SGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKL 504

Query: 182 MKDRGLKKSIACSWIKVKNEVHVFLVEDMSHPQAEKIYAELERVEELMTD 331
           M DR LKKSIACSWI+VKN+VH FL  D SHP +++IY+ELERV  LM +
Sbjct: 505 MTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKE 554


>emb|CBI36131.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score =  174 bits (440), Expect = 9e-42
 Identities = 85/110 (77%), Positives = 96/110 (87%)
 Frame = +2

Query: 2   SGVWGALLNSCKLHGNVELGEEALLRLIDLEPRDAGNYVILSNIYAQAGKWEGVARVRKL 181
           SGVWGALLNSCK+H NVELGE AL RLI+LEP DAGNYVILSNIYAQAGKWEGVA++RKL
Sbjct: 347 SGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKL 406

Query: 182 MKDRGLKKSIACSWIKVKNEVHVFLVEDMSHPQAEKIYAELERVEELMTD 331
           M DR LKKSIACSWI+VKN+VH FL  D SHP +++IY+ELERV  LM +
Sbjct: 407 MTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKE 456


>ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449522468|ref|XP_004168248.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  166 bits (421), Expect = 1e-39
 Identities = 77/110 (70%), Positives = 96/110 (87%)
 Frame = +2

Query: 2   SGVWGALLNSCKLHGNVELGEEALLRLIDLEPRDAGNYVILSNIYAQAGKWEGVARVRKL 181
           +GVWGALL+SCK+HGNVE+GE AL +L++LEP D GNYVILSN+YAQAGKW+GVAR+R L
Sbjct: 371 AGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDL 430

Query: 182 MKDRGLKKSIACSWIKVKNEVHVFLVEDMSHPQAEKIYAELERVEELMTD 331
           M ++GLKKSIACSWI+V N+VH FL ED SHP++E IYAEL+R  +LM +
Sbjct: 431 MMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKE 480


>ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score =  164 bits (415), Expect = 7e-39
 Identities = 77/110 (70%), Positives = 96/110 (87%)
 Frame = +2

Query: 2   SGVWGALLNSCKLHGNVELGEEALLRLIDLEPRDAGNYVILSNIYAQAGKWEGVARVRKL 181
           SGVWGALLNSCK HGNVEL E AL +LI+LEP D+GNYVIL+N+YAQ+GKWEGVAR+R+L
Sbjct: 428 SGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQL 487

Query: 182 MKDRGLKKSIACSWIKVKNEVHVFLVEDMSHPQAEKIYAELERVEELMTD 331
           M D+G+KK+IACSWI+VKN+V+ FL  D+SHP +  IYAEL+R+E LM +
Sbjct: 488 MIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMRE 537


>dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  164 bits (414), Expect = 9e-39
 Identities = 77/110 (70%), Positives = 93/110 (84%)
 Frame = +2

Query: 2   SGVWGALLNSCKLHGNVELGEEALLRLIDLEPRDAGNYVILSNIYAQAGKWEGVARVRKL 181
           SG+WGALLN CK+H NVELGE AL +LI+LEP DAGNYV LSNIYAQ+GKWE  ARVRKL
Sbjct: 434 SGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARVRKL 493

Query: 182 MKDRGLKKSIACSWIKVKNEVHVFLVEDMSHPQAEKIYAELERVEELMTD 331
           M +RGLKK +ACSWI++K + H FLV D SHP++++IY ELER+E LM+D
Sbjct: 494 MTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERLEGLMSD 543