BLASTX nr result

ID: Coptis25_contig00045318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045318
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271263.2| PREDICTED: uncharacterized protein LOC100254...   158   5e-37
emb|CAN62134.1| hypothetical protein VITISV_043718 [Vitis vinifera]   158   5e-37
ref|XP_002303331.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
ref|XP_002331190.1| predicted protein [Populus trichocarpa] gi|2...   142   4e-32
ref|XP_002277309.1| PREDICTED: uncharacterized protein LOC100267...   137   1e-30

>ref|XP_002271263.2| PREDICTED: uncharacterized protein LOC100254952 [Vitis vinifera]
          Length = 1848

 Score =  158 bits (399), Expect = 5e-37
 Identities = 83/139 (59%), Positives = 95/139 (68%), Gaps = 4/139 (2%)
 Frame = +1

Query: 4    WSGMPFQAFYYSFNKIYSGIIPKFDTLSDYNPVYVSSFRELKRQSRARLLFPVGVNDTVV 183
            WSGM F  FY +FNK + G   K DTL +YNPVYVSSFREL+ Q  ARLL PVGVNDTV+
Sbjct: 1385 WSGMSFLNFYRAFNKNFLGSAQKLDTLGEYNPVYVSSFRELELQGGARLLLPVGVNDTVI 1444

Query: 184  PIYDQEPTSIISYTLLSPDYHAQMLDERERLNSA----VSLPLHDSTNINLRHSLDGATS 351
            P+YD EPTSII Y L+SP YHAQ+LDE ER         S  L +S N+    S D   S
Sbjct: 1445 PVYDDEPTSIICYALVSPQYHAQLLDEWERPKDGGEPMSSSSLSESVNLQSFLSFDETVS 1504

Query: 352  ESFRSFGSTDDSFLSKSGS 408
            ESF++F S DDSFLS SGS
Sbjct: 1505 ESFKNFSSIDDSFLSMSGS 1523


>emb|CAN62134.1| hypothetical protein VITISV_043718 [Vitis vinifera]
          Length = 1893

 Score =  158 bits (399), Expect = 5e-37
 Identities = 83/139 (59%), Positives = 95/139 (68%), Gaps = 4/139 (2%)
 Frame = +1

Query: 4    WSGMPFQAFYYSFNKIYSGIIPKFDTLSDYNPVYVSSFRELKRQSRARLLFPVGVNDTVV 183
            WSGM F  FY +FNK + G   K DTL +YNPVYVSSFREL+ Q  ARLL PVGVNDTV+
Sbjct: 1375 WSGMSFLNFYRAFNKNFLGSAQKLDTLGEYNPVYVSSFRELELQGGARLLLPVGVNDTVI 1434

Query: 184  PIYDQEPTSIISYTLLSPDYHAQMLDERERLNSA----VSLPLHDSTNINLRHSLDGATS 351
            P+YD EPTSII Y L+SP YHAQ+LDE ER         S  L +S N+    S D   S
Sbjct: 1435 PVYDDEPTSIICYALVSPQYHAQLLDEWERPKDGGEPMSSSSLSESVNLQSFLSFDETVS 1494

Query: 352  ESFRSFGSTDDSFLSKSGS 408
            ESF++F S DDSFLS SGS
Sbjct: 1495 ESFKNFSSIDDSFLSMSGS 1513


>ref|XP_002303331.1| predicted protein [Populus trichocarpa] gi|222840763|gb|EEE78310.1|
           predicted protein [Populus trichocarpa]
          Length = 664

 Score =  149 bits (376), Expect = 2e-34
 Identities = 74/135 (54%), Positives = 93/135 (68%)
 Frame = +1

Query: 4   WSGMPFQAFYYSFNKIYSGIIPKFDTLSDYNPVYVSSFRELKRQSRARLLFPVGVNDTVV 183
           W  MPF  FY SFN        K D+L +YNPVY+SSFR+LK Q +ARLL PVGVNDTV+
Sbjct: 204 WLRMPFLNFYRSFNNNCLTSSEKLDSLREYNPVYISSFRKLKLQDQARLLLPVGVNDTVI 263

Query: 184 PIYDQEPTSIISYTLLSPDYHAQMLDERERLNSAVSLPLHDSTNINLRHSLDGATSESFR 363
           P+YD EPTS+ISY L+S +YHAQ+ DE ER+  +       S +  + HS D  + +S+R
Sbjct: 264 PVYDDEPTSLISYALVSQEYHAQLTDEGERVKESGEFSPFSSLSDTMFHSFDETSFDSYR 323

Query: 364 SFGSTDDSFLSKSGS 408
           SFGSTD+S LS SGS
Sbjct: 324 SFGSTDESILSMSGS 338


>ref|XP_002331190.1| predicted protein [Populus trichocarpa] gi|222873311|gb|EEF10442.1|
            predicted protein [Populus trichocarpa]
          Length = 1763

 Score =  142 bits (357), Expect = 4e-32
 Identities = 73/135 (54%), Positives = 90/135 (66%)
 Frame = +1

Query: 4    WSGMPFQAFYYSFNKIYSGIIPKFDTLSDYNPVYVSSFRELKRQSRARLLFPVGVNDTVV 183
            W  MPF  FY S NK +     K  TL +YNPVYVSSFR L+ Q  ARLL PVGVNDTV+
Sbjct: 1304 WLRMPFLNFYRSLNKNFLTSSEKLGTLGEYNPVYVSSFRSLELQGGARLLLPVGVNDTVI 1363

Query: 184  PIYDQEPTSIISYTLLSPDYHAQMLDERERLNSAVSLPLHDSTNINLRHSLDGATSESFR 363
            P+YD EPTS+ISY L SP+YHAQ+ DE ER+          S + +  HSL+  + + ++
Sbjct: 1364 PVYDDEPTSLISYALASPEYHAQLTDEGERIKDTGESSSFSSLSESF-HSLEEVSLDLYK 1422

Query: 364  SFGSTDDSFLSKSGS 408
            SFGSTD+S LS SGS
Sbjct: 1423 SFGSTDESILSMSGS 1437


>ref|XP_002277309.1| PREDICTED: uncharacterized protein LOC100267980 [Vitis vinifera]
          Length = 1865

 Score =  137 bits (344), Expect = 1e-30
 Identities = 74/137 (54%), Positives = 93/137 (67%), Gaps = 4/137 (2%)
 Frame = +1

Query: 10   GMPFQAFYYSFNKIYSGIIPKFDTLSDYNPVYVSSFRELKRQSRARLLFPVGVNDTVVPI 189
            G+PF  F Y F+K  S    K   + +YNP YV SFREL+ Q  ARLL PVGVN+TVVP+
Sbjct: 1405 GVPFSNFSYMFSKNSSWNAQKLGIICEYNPAYVLSFRELEHQGGARLLLPVGVNETVVPV 1464

Query: 190  YDQEPTSIISYTLLSPDYHAQMLDERERL----NSAVSLPLHDSTNINLRHSLDGATSES 357
            YD EPTSIISY L+SPDYHAQ+ +E ER      S+VSLP+ +  N+   HS D   SES
Sbjct: 1465 YDDEPTSIISYALVSPDYHAQVSNELERQKDSGESSVSLPIFE--NLLSLHSFDETASES 1522

Query: 358  FRSFGSTDDSFLSKSGS 408
            +++  STD++ LS SGS
Sbjct: 1523 YKNLVSTDENILSLSGS 1539


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