BLASTX nr result

ID: Coptis25_contig00045284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045284
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1...    87   2e-15
ref|XP_003636005.1| Helicase-like protein [Medicago truncatula] ...    82   6e-14
ref|XP_003607945.1| Helicase-like protein [Medicago truncatula] ...    80   1e-13
ref|XP_003604594.1| Helicase-like protein [Medicago truncatula] ...    80   2e-13
ref|XP_003619589.1| Defensin-like protein [Medicago truncatula] ...    79   3e-13

>gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1-like protein [Beta
            vulgaris subsp. vulgaris]
          Length = 2037

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/85 (51%), Positives = 61/85 (71%)
 Frame = +2

Query: 2    PTSSEVAALIVGDDLEITDHRDIIVETQRGALQRINELYPKFMAMQYPILFPRGEDGYRV 181
            PT+SEVAALI+GD     ++RDI+ ET+ GALQRI+EL+P ++A+QYP+LFP GED YR+
Sbjct: 939  PTASEVAALIIGDIDNFANNRDIVAETRGGALQRISELHPSYLALQYPLLFPYGEDSYRI 998

Query: 182  GILLRGVDINNVQNSQKRYIVTMRQ 256
             I L     +N   +  R  V+MR+
Sbjct: 999  DIKL-----SNTGRNGGRSRVSMRE 1018


>ref|XP_003636005.1| Helicase-like protein [Medicago truncatula]
           gi|355501940|gb|AES83143.1| Helicase-like protein
           [Medicago truncatula]
          Length = 1844

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/81 (49%), Positives = 58/81 (71%)
 Frame = +2

Query: 2   PTSSEVAALIVGDDLEITDHRDIIVETQRGALQRINELYPKFMAMQYPILFPRGEDGYRV 181
           PT SEVAAL++GD ++   +RDII++ Q G LQRI+E +  +++ QYP++FP GEDGYR 
Sbjct: 644 PTVSEVAALVLGD-IDSASYRDIIMQGQSGNLQRIDEFHASYLSFQYPLIFPYGEDGYRP 702

Query: 182 GILLRGVDINNVQNSQKRYIV 244
            ILLR VD  ++   +K  I+
Sbjct: 703 SILLRFVDDTDITKKKKLTIM 723


>ref|XP_003607945.1| Helicase-like protein [Medicago truncatula]
           gi|355509000|gb|AES90142.1| Helicase-like protein
           [Medicago truncatula]
          Length = 1651

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 40/67 (59%), Positives = 51/67 (76%)
 Frame = +2

Query: 2   PTSSEVAALIVGDDLEITDHRDIIVETQRGALQRINELYPKFMAMQYPILFPRGEDGYRV 181
           PT SEVAALIVGD ++    RDII+E Q G L+RI+E +P ++A QYP+LFP GEDGYR 
Sbjct: 469 PTVSEVAALIVGD-VDSAARRDIIMERQSGRLERIDEFHPAYLAYQYPLLFPYGEDGYRD 527

Query: 182 GILLRGV 202
            +L RG+
Sbjct: 528 DVLHRGI 534


>ref|XP_003604594.1| Helicase-like protein [Medicago truncatula]
           gi|355505649|gb|AES86791.1| Helicase-like protein
           [Medicago truncatula]
          Length = 1689

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 44/85 (51%), Positives = 57/85 (67%)
 Frame = +2

Query: 2   PTSSEVAALIVGDDLEITDHRDIIVETQRGALQRINELYPKFMAMQYPILFPRGEDGYRV 181
           PT SEVAALI+GD ++    RDII+ETQ G LQRI+E +P ++A QYP+LFP GEDGYR 
Sbjct: 489 PTVSEVAALILGD-VDYAPRRDIIMETQCGELQRIDEFHPAYLAYQYPLLFPYGEDGYRD 547

Query: 182 GILLRGVDINNVQNSQKRYIVTMRQ 256
            +L R           KR  +T+R+
Sbjct: 548 DVLHRD---KKTGKKPKRVHLTIRE 569


>ref|XP_003619589.1| Defensin-like protein [Medicago truncatula]
           gi|355494604|gb|AES75807.1| Defensin-like protein
           [Medicago truncatula]
          Length = 1645

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/65 (61%), Positives = 50/65 (76%)
 Frame = +2

Query: 2   PTSSEVAALIVGDDLEITDHRDIIVETQRGALQRINELYPKFMAMQYPILFPRGEDGYRV 181
           PT SEVAALI+GD ++    RDII+ETQ G LQRI+E +P ++A QYP+LFP GEDGYR 
Sbjct: 464 PTVSEVAALILGD-VDYAPRRDIIMETQCGELQRIDEFHPAYLAYQYPLLFPYGEDGYRD 522

Query: 182 GILLR 196
            +L R
Sbjct: 523 DVLHR 527


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