BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045273
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38872.3| unnamed protein product [Vitis vinifera]              121   7e-26
ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi...   121   7e-26
emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]   118   6e-25
ref|XP_002320719.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_003516456.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   112   2e-23

>emb|CBI38872.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  121 bits (303), Expect = 7e-26
 Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 3/95 (3%)
 Frame = -2

Query: 278 AHSPQPWNSPTPTLHLLQTCKTLQHINQIHARIITTGLIRNSFLTTELIINFSSSPHQPL 99
           A S QPWNS  PTL LL   KTL  +NQIH+R+ITTG I N  LTT +I+NFSSS H+PL
Sbjct: 5   ATSNQPWNSTHPTLILLPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPL 64

Query: 98  VDFARYIFFSQH---SHKNYTDPFLWNLIIKSFSH 3
           V+FARY+F S+H    H+   +PFLWN IIKSFSH
Sbjct: 65  VEFARYLFMSRHFGRKHRKQDNPFLWNAIIKSFSH 99


>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Vitis vinifera]
          Length = 635

 Score =  121 bits (303), Expect = 7e-26
 Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 3/95 (3%)
 Frame = -2

Query: 278 AHSPQPWNSPTPTLHLLQTCKTLQHINQIHARIITTGLIRNSFLTTELIINFSSSPHQPL 99
           A S QPWNS  PTL LL   KTL  +NQIH+R+ITTG I N  LTT +I+NFSSS H+PL
Sbjct: 5   ATSNQPWNSTHPTLILLPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPL 64

Query: 98  VDFARYIFFSQH---SHKNYTDPFLWNLIIKSFSH 3
           V+FARY+F S+H    H+   +PFLWN IIKSFSH
Sbjct: 65  VEFARYLFMSRHFGRKHRKQDNPFLWNAIIKSFSH 99


>emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
          Length = 690

 Score =  118 bits (295), Expect = 6e-25
 Identities = 56/91 (61%), Positives = 68/91 (74%), Gaps = 3/91 (3%)
 Frame = -2

Query: 266 QPWNSPTPTLHLLQTCKTLQHINQIHARIITTGLIRNSFLTTELIINFSSSPHQPLVDFA 87
           +PWNS  PTL LL   KTL  +NQIH+R+ITTG I N  LTT +I+NFSSS H+PLV+FA
Sbjct: 65  KPWNSTHPTLILLPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEFA 124

Query: 86  RYIFFSQH---SHKNYTDPFLWNLIIKSFSH 3
           RY+F S+H    H+   +PFLWN IIKSFSH
Sbjct: 125 RYLFMSRHFGRKHRKQDNPFLWNAIIKSFSH 155


>ref|XP_002320719.1| predicted protein [Populus trichocarpa] gi|222861492|gb|EEE99034.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/95 (56%), Positives = 71/95 (74%), Gaps = 7/95 (7%)
 Frame = -2

Query: 266 QPWNSPTPTLHLLQTCKTLQHINQIHARIITTGLIRNSFLTTELIINFSSSPHQPLVDFA 87
           QPWNS  PTL LL+ CK L  INQIHAR++TTG I+N+FLTT++I++FS+S H PL++FA
Sbjct: 10  QPWNSAIPTLVLLKKCKRLSDINQIHARLLTTGFIKNTFLTTKIILSFSTSLHAPLIEFA 69

Query: 86  RYIFFSQHS-------HKNYTDPFLWNLIIKSFSH 3
           R+IFF  H+        +   DPFLWN IIK++SH
Sbjct: 70  RFIFFRHHAFEFDEKEEEEEKDPFLWNAIIKTYSH 104


>ref|XP_003516456.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g45350, chloroplastic-like [Glycine max]
          Length = 426

 Score =  112 bits (281), Expect = 2e-23
 Identities = 50/99 (50%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
 Frame = -2

Query: 296 MVAVTLAHSPQPWNSPTPTLHLLQTCKTLQHINQIHARIITTGLIRNSFLTTELIINFSS 117
           +V  + + S QPW SP PTL  L  C T + +NQ+HAR+ITTG I+N  L  +L+++F S
Sbjct: 2   LVCASFSSSHQPWASPIPTLTTLPKCTTTEQVNQLHARMITTGFIKNPSLAAKLVLSFIS 61

Query: 116 SPHQPLVDFARYIFFSQHS-HKNYTDPFLWNLIIKSFSH 3
           SPH+PLV+FARY+F+  H+ H    DPF WN +I+S SH
Sbjct: 62  SPHEPLVEFARYVFYMHHAFHDFCNDPFFWNPLIRSHSH 100